RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CPNE5Q9HCH3 593 aa17.74■□□□□ 0.43
SDC2-202ENST00000518385 PAK1IP1Q9NWT1 392 aaPredicted RBP17.74■□□□□ 0.43
SDC2-202ENST00000518385 SCN3BQ9NY72 215 aa17.74■□□□□ 0.43
SDC2-202ENST00000518385 TMPRSS11EQ9UL52 423 aa17.74■□□□□ 0.43
SDC2-202ENST00000518385 PCDHGA8Q9Y5G5 932 aa17.74■□□□□ 0.43
SDC2-202ENST00000518385 CORINQ9Y5Q5 1042 aa17.74■□□□□ 0.43
SDC2-202ENST00000518385 C5orf42Q9H799 3197 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 ELOVL7A1L3X0 281 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 SAGE2PA6NJ88 616 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 J3QRK9 145 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 M0R3G1 203 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 GNGT2O14610 69 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 KAT7O95251 611 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 ANXA5P08758 320 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 IL12AP29459 219 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 CCR7P32248 378 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 GGT5P36269 586 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 HNMTP50135 292 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 ISL1P61371 349 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 FADDQ13158 208 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 KRR1Q13601 381 aaKnown RBP17.73■□□□□ 0.43
SDC2-202ENST00000518385 ELAVL3Q14576 367 aaKnown RBP17.73■□□□□ 0.43
SDC2-202ENST00000518385 CTF1Q16619 201 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 FNDC3BQ53EP0 1204 aaKnown RBP17.73■□□□□ 0.43
SDC2-202ENST00000518385 CYP20A1Q6UW02 462 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 LIPIQ6XZB0 460 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 RFLNAQ6ZTI6 216 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 Q6ZVL8 140 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 ZNF765Q7L2R6 523 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 GOLGA7Q7Z5G4 137 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 NLRP8Q86W28 1048 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 ZNF548Q8NEK5 533 aaPredicted RBP17.73■□□□□ 0.43
SDC2-202ENST00000518385 CSGALNACT1Q8TDX6 532 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 BTN2A2Q8WVV5 523 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 RORBQ92753 470 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 FBXL8Q96CD0 374 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 TEX37Q96LM6 180 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 EGFL8Q99944 293 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 PHF7Q9BWX1 381 aaPredicted RBP17.73■□□□□ 0.43
SDC2-202ENST00000518385 ACTR8Q9H981 624 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 TRPV5Q9NQA5 729 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 ZNF225Q9UK10 706 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 AP1M2Q9Y6Q5 423 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 PLXNA2O75051 1894 aa17.73■□□□□ 0.43
SDC2-202ENST00000518385 TMX2-CTNND1H3BSU7 103 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 ANKRD28O15084 1053 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 RGS14O43566 566 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 PRKD3O94806 890 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 ELFN1P0C7U0 828 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 ACVR2AP27037 513 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 CD47Q08722 323 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 KCNAB2Q13303 367 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 C9orf64Q5T6V5 341 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 SYT6Q5T7P8 510 aaPredicted RBP17.72■□□□□ 0.43
SDC2-202ENST00000518385 SLC2A7Q6PXP3 512 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 MSANTD1Q6ZTZ1 278 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 NUDT18Q6ZVK8 323 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 DSG4Q86SJ6 1040 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 SFTPA1Q8IWL2 248 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 ASZ1Q8WWH4 475 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 IPCEF1Q8WWN9 437 aaPredicted RBP17.72■□□□□ 0.43
SDC2-202ENST00000518385 SLC13A3Q8WWT9 602 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 FCGR1BQ92637 280 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 HLA-CQ95604 372 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 GUCD1Q96NT3 240 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 NTMT1Q9BV86 223 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 EPHX3Q9H6B9 360 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 PARVBQ9HBI1 364 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 WWOXQ9NZC7 414 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 OPTCQ9UBM4 332 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 LIMD1Q9UGP4 676 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 UGT2A1Q9Y4X1 527 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 TIMM22Q9Y584 194 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 ANGPTL3Q9Y5C1 460 aa17.72■□□□□ 0.43
SDC2-202ENST00000518385 PABPN1LA6NDY0 278 aaKnown RBP17.71■□□□□ 0.43
SDC2-202ENST00000518385 WNT9AO14904 365 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 TAPBPO15533 448 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 AQP9O43315 295 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 FOXD2O60548 495 aaPredicted RBP17.71■□□□□ 0.43
SDC2-202ENST00000518385 ERN1O75460 977 aaKnown RBP17.71■□□□□ 0.43
SDC2-202ENST00000518385 APODP05090 189 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 HIST1H2AGP0C0S8 130 aaPredicted RBP17.71■□□□□ 0.43
SDC2-202ENST00000518385 FOSL2P15408 326 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 HIST1H2ADP20671 130 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 HTR1BP28222 390 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 HPCAL1P37235 193 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 CASP2P42575 452 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 EIF2B2P49770 351 aaKnown RBP17.71■□□□□ 0.43
SDC2-202ENST00000518385 AP1S2P56377 157 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 ERVPABLB-1P60509 514 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 TUBA1BP68363 451 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 CYP4F3Q08477 520 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 SPCS2Q15005 226 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 KIAA0040Q15053 153 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 ZIK1Q3SY52 487 aaPredicted RBP17.71■□□□□ 0.43
SDC2-202ENST00000518385 Q6ZSR9 355 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 TUBA1AQ71U36 451 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 PARS2Q7L3T8 475 aaKnown RBP17.71■□□□□ 0.43
SDC2-202ENST00000518385 MILR1Q7Z6M3 343 aa17.71■□□□□ 0.43
SDC2-202ENST00000518385 SLCO6A1Q86UG4 719 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms