RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 FASTKD1Q53R41 847 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 GARNL3Q5VVW2 1013 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 ZNF425Q6IV72 752 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 PRSS41Q7RTY9 318 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 VSTM4Q8IW00 320 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 GHDCQ8N2G8 530 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 MARVELD2Q8N4S9 558 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 RAB42Q8N4Z0 105 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 DNAAF3Q8N9W5 541 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 METTL21AQ8WXB1 218 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 ALG3Q92685 438 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 P2RY12Q9H244 342 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 KCNK13Q9HB14 408 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 MRPS30Q9NP92 439 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 SPATA7Q9P0W8 599 aa10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 TSR3Q9UJK0 312 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-205ENST00000517904 GABRR3A8MPY1 467 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 PRRG2O14669 202 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 TJP3O95049 919 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 STATHP02808 62 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 SP1P08047 785 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 CD46P15529 392 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 ZNF24P17028 368 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 DNAJA1P31689 397 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 CCNFP41002 786 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 MAGEA1P43355 309 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 TFF3Q07654 80 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 FAM53BQ14153 422 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 NAA25Q14CX7 972 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 MEP1AQ16819 746 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 MINDY4Q4G0A6 757 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 ZNF468Q5VIY5 522 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 PTRHD1Q6GMV3 140 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 ANKRD37Q7Z713 158 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 LINC00523Q86TU6 105 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 PLD3Q8IV08 490 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 CPSF7Q8N684 471 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 TMEM178AQ8NBL3 297 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 OR9A4Q8NGU2 314 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 GSDMBQ8TAX9 411 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 PCYOX1Q9UHG3 505 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 RIMKLBQ9ULI2 386 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 HRH3Q9Y5N1 445 aa10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 NSD1Q96L73 2696 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-205ENST00000517904 SCN3AQ9NY46 2000 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 NKX2-6A6NCS4 301 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 SOWAHDA6NJG2 315 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 ARHGEF33A8MVX0 844 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 HAT1O14929 419 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 PSMD3O43242 534 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 ZNF189O75820 626 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 MATN4O95460 622 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 EZRP15311 586 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 ADRA1DP25100 572 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 PTGER1P34995 402 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 PPARGP37231 505 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 AVPR1BP47901 424 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 IST1P53990 364 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 RWDD2BP57060 319 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 PRAMEP78395 509 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 OC90Q02509 493 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 GBX1Q14549 363 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 AARS2Q5JTZ9 985 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 CTSL3PQ5NE16 218 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 MFSD4BQ5TF39 518 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 ICE2Q659A1 982 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 SLC25A25Q6KCM7 469 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 OTOAQ7RTW8 1153 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 ZNF227Q86WZ6 799 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 OR9A1PQ8NGU1 263 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 M1APQ8TC57 530 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 SMPDL3AQ92484 453 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 RERGQ96A58 199 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 PANX3Q96QZ0 392 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 UCK2Q9BZX2 261 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 MMP25Q9NPA2 562 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 CATSPERZQ9NTU4 200 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 COQ3Q9NZJ6 369 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 C19orf25Q9UFG5 118 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 TAC3Q9UHF0 121 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 GNPTGQ9UJJ9 305 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 MRFAP1Q9Y605 127 aa10.69□□□□□ -0.7
CTNNA1-205ENST00000517904 FAM221AA4D161 298 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 H0YIG0 161 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 MYO1CO00159 1063 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 CD3EAPO15446 510 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 NME2P1O60361 137 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 SLC25A12O75746 678 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 TOXO94900 526 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 SUN1O94901 812 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 CYC1P08574 325 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 TPM1P09493 284 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 PKMP14618 531 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 NME2P22392 152 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 RPS3P23396 243 aaKnown RBP eCLIP10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 MSX1P28360 303 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 RPA3P35244 121 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 XCR1P46094 333 aa10.68□□□□□ -0.7
CTNNA1-205ENST00000517904 TTPAP49638 278 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms