RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 DNPEPQ9ULA0 475 aa2.7□□□□□ -1.98
SKP1-204ENST00000517691 SNX12Q9UMY4 172 aa2.7□□□□□ -1.98
SKP1-204ENST00000517691 PLA2G2DQ9UNK4 145 aa2.7□□□□□ -1.98
SKP1-204ENST00000517691 ZFR2Q9UPR6 939 aaKnown RBP2.7□□□□□ -1.98
SKP1-204ENST00000517691 AURKCQ9UQB9 309 aa2.7□□□□□ -1.98
SKP1-204ENST00000517691 CA5BQ9Y2D0 317 aa2.7□□□□□ -1.98
SKP1-204ENST00000517691 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.7□□□□□ -1.98
SKP1-204ENST00000517691 SLCO1B1Q9Y6L6 691 aa2.7□□□□□ -1.98
SKP1-204ENST00000517691 MYO15AQ9UKN7 3530 aa2.7□□□□□ -1.98
SKP1-204ENST00000517691 MUC6Q6W4X9 2439 aa2.7□□□□□ -1.98
SKP1-204ENST00000517691 A0A0G2JPF8 293 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GOLGA6L10A0A0M3HER8 536 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 TSPAN11A1L157 253 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SMIM30A4D0T7 59 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM90A18PA6NE21 464 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM90A16PA6NEW6 464 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 C5orf60A6NFR6 353 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM90A20PA6NIJ5 464 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM90A9PA6NNJ1 464 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM90A5PA8MXJ8 464 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ANKRD66B4E2M5 251 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 HNRNPCL3B7ZW38 293 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KIF2AO00139 706 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 TLR4O00206 839 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PGRMC1O00264 195 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PGRMC2O15173 223 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RAD51BO15315 384 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TNFSF14O43557 240 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LATO43561 262 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 OPHN1O60890 802 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LRP3O75074 770 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GCATO75600 419 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ZNF189O75820 626 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 RECQL5O94762 991 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 OR2C1O95371 312 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CLDN7O95471 211 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GAS8O95995 478 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PNPP00491 289 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 MPOP05164 745 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM90A15PP0C7V4 464 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM90A14PP0C7W9 464 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ZSCAN5DPP0CG00 497 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 HNRNPCL4P0DMR1 293 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ENGP17813 658 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TCP1P17987 556 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 HNRNPA2B1P22626 353 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PTAFRP25105 342 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PSMA4P25789 261 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PSMB4P28070 264 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CD38P28907 300 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 VIPR1P32241 457 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 NUDT1P36639 197 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 MMP12P39900 470 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KCNJ1P48048 391 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ARCN1P48444 511 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 CENPAP49450 140 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 DIO1P49895 249 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GEMP55040 296 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SESN2P58004 480 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 ACTR1AP61163 376 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PRR5P85299 388 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 IHHQ14623 411 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RPS6KA2Q15349 733 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TRIP13Q15645 432 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 CSRP2Q16527 193 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KCTD19Q17RG1 926 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PARP6Q2NL67 630 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KIF19Q2TAC6 998 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CR1LQ2VPA4 569 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GALNTL6Q49A17 601 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TMEM52BQ4KMG9 183 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PLEKHS1Q5SXH7 462 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RBM20Q5T481 1227 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PRAMEF9Q5VWM5 478 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 NAPEPLDQ6IQ20 393 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 INO80CQ6PI98 192 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM111BQ6SJ93 734 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ZDHHC24Q6UX98 284 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SYT10Q6XYQ8 523 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LIPIQ6XZB0 460 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 Q6ZSR6 202 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 DPPA4Q7L190 304 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PTAR1Q7Z6K3 402 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PRUNE1Q86TP1 453 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TSPAN33Q86UF1 283 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 MPP5Q8N3R9 675 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FBXW8Q8N3Y1 598 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 POMGNT2Q8NAT1 580 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KIF18AQ8NI77 898 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CCHCR1Q8TD31 782 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 BLOC1S5Q8TDH9 187 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 BRIX1Q8TDN6 353 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 FAM216AQ8WUB2 273 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PIH1D2Q8WWB5 315 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 MAGOHBQ96A72 148 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 TUBGCP3Q96CW5 907 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ECHDC3Q96DC8 303 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SCRN2Q96FV2 425 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms