RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SPPL3Q8TCT6 385 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF431Q8TF32 576 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TSPEARQ8WU66 669 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SFT2D1Q8WV19 159 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 BTN2A2Q8WVV5 523 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 LRTOMTQ8WZ04 291 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ALG3Q92685 438 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KAT5Q92993 513 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF566Q969W8 418 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KIAA1143Q96AT1 154 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CREB3L1Q96BA8 519 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 DCPSQ96C86 337 aaKnown RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZBED3Q96IU2 234 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 UBXN10Q96LJ8 280 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ERMAPQ96PL5 475 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SORCS2Q96PQ0 1159 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 CSF3RQ99062 836 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 NELL2Q99435 816 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC30A2Q9BRI3 323 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 LXNQ9BS40 222 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KATNAL1Q9BW62 490 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 PINK1Q9BXM7 581 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KRTAP17-1Q9BYP8 105 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANKRD19PQ9H560 264 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARMT1Q9H993 441 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 LRRC4Q9HBW1 653 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TCF7L1Q9HCS4 588 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 RANGRFQ9HD47 186 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 ENTPD7Q9NQZ7 604 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRMT8Q9NR22 394 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 POLE4Q9NR33 117 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TLR9Q9NR96 1032 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 GLRX2Q9NS18 164 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 TBC1D13Q9NVG8 400 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 FBXL12Q9NXK8 326 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYEF2Q9P2K5 600 aaKnown RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC17A7Q9P2U7 560 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 MIOXQ9UGB7 285 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 STUB1Q9UNE7 303 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KCNJ14Q9UNX9 436 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KCNIP3Q9Y2W7 256 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 HCFC2Q9Y5Z7 792 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 PSAT1Q9Y617 370 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 DGKBQ9Y6T7 804 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 KIAA0556O60303 1618 aa4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 FRMPD2Q68DX3 1309 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P19-201ENST00000517578 DDX60Q8IY21 1712 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 NRKQ7Z2Y5 1582 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYH9P35579 1960 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A1W2PPL8 197 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANKDD1BA6NHY2 528 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 A8MXK9 166 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 KBTBD13C9JR72 458 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 hCG_1984214I3L0E3 225 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 K7ERQ8 282 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 M0QZK8 103 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 AIPO00170 330 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PDHXO00330 501 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC28A1O00337 649 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CLDN4O14493 209 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 AP3D1O14617 1153 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 TCAPO15273 167 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CD3EAPO15446 510 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CHP2O43745 196 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 GLRA3O75311 464 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC43A1O75387 559 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 VPS26AO75436 327 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 RPS6KA4O75676 772 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SOAT2O75908 522 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CABYRO75952 493 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 WDR47O94967 919 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAPSS2O95340 614 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 NSA2O95478 260 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 LDLRP01130 860 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 DNTTP04053 509 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ASGR1P07306 291 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 SNRPB2P08579 225 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 STSP08842 583 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 IFIT1P09914 478 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR56A5P0C7T3 313 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 FGFR1P11362 822 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRPS2P11908 318 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF250P15622 560 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CHRNB2P17787 502 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 COMTP21964 271 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAICSP22234 425 aaKnown RBP4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CBLP22681 906 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ITGB8P26012 769 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 HSD3B2P26439 372 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CRABP1P29762 137 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 RYKP34925 604 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 BMI1P35226 326 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 RFC3P40938 356 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ECI1P42126 302 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 BRCC3P46736 316 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 RGS6P49758 472 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 GATMP50440 423 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 ERFP50548 548 aa4.66□□□□□ -1.66
HMGB1P19-201ENST00000517578 CYP2J2P51589 502 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms