RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 RC3H2Q9HBD1 1191 aaKnown RBP10.73□□□□□ -0.69
TRIM41-209ENST00000515834 SPATA7Q9P0W8 599 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 JUNDP17535 347 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 S100A10P60903 97 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 SLC3A1Q07837 685 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 ST3GAL4Q11206 333 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 RAET1LQ5VY80 246 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 PAQR3Q6TCH7 311 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 COMMD3Q9UBI1 195 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 PCDHGB1Q9Y5G3 927 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 BACE2Q9Y5Z0 518 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 COMMD3-BMI1R4GMX3 469 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 PMF1-BGLAPU3KQ54 211 aa10.73□□□□□ -0.69
TRIM41-209ENST00000515834 OR6C74A6NCV1 312 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ITGA10O75578 1167 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ETS2P15036 469 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 OR2B6P58173 313 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 RBM48Q5RL73 367 aaKnown RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 FAM69BQ5VUD6 431 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 HPS1Q92902 700 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 TCEAL3Q969E4 200 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 PKP4Q99569 1192 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 SLC5A7Q9GZV3 580 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 B4GALT7Q9UBV7 327 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 C2CD4BA6NLJ0 364 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ASPAP45381 313 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 DCBLD2Q96PD2 775 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 XKR8Q9H6D3 395 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 PRTFDC1Q9NRG1 225 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 DZANK1Q9NVP4 752 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 GNG8Q9UK08 70 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 TCRBV7S2A1N4TA0A589 114 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 J3QLW9 94 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 VEGFDO43915 354 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 SCELO95171 688 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 FARS2O95363 451 aaKnown RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF19P17023 458 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 SNU13P55769 128 aaKnown RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 RPL19P84098 196 aaKnown RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 GALK2Q01415 458 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 MFSD2AQ8NA29 543 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 SMPDL3AQ92484 453 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 DEFB126Q9BYW3 111 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF226Q9NYT6 803 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 TEX13CA0A0J9YWL9 993 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 HTR3EA5X5Y0 456 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 E7ENX8 843 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 DUX1O43812 170 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 KCNJ13O60928 360 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 RHOP08100 348 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 MATN1P21941 496 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 PTX3P26022 381 aaPredicted RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 PON2Q15165 354 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 FAM182AQ5T1J6 154 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF648Q5T619 568 aaPredicted RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 CNDP2Q96KP4 475 aaKnown RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 FZD3Q9NPG1 666 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 VNN2O95498 520 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 GALTP07902 379 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 KLHL22Q53GT1 634 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 C22orf39Q6P5X5 142 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 TSACCQ96A04 125 aaPredicted RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 PTCHD1Q96NR3 888 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 CCDC28BQ9BUN5 200 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 MRM3Q9HC36 420 aaKnown RBP10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF670-ZNF695F2Z2N8 137 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 AGR2O95994 175 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 RAB28P51157 221 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 ARHGAP1Q07960 439 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 GPR33Q49SQ1 333 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 LIX1LQ8IVB5 337 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 PQLC1Q8N2U9 271 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 KLHL36Q8N4N3 616 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 LRTOMTQ8WZ04 291 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 SFXN1Q9H9B4 322 aa10.72□□□□□ -0.69
TRIM41-209ENST00000515834 C2orf74A8MZ97 194 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 SEC14L5O43304 696 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 ERCC1P07992 297 aaPredicted RBP10.71□□□□□ -0.69
TRIM41-209ENST00000515834 ENGP17813 658 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 PDCD4Q53EL6 469 aaKnown RBP10.71□□□□□ -0.69
TRIM41-209ENST00000515834 SLC30A8Q8IWU4 369 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF283Q8N7M2 679 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 FAM156AQ8NDB6 213 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 NFKBIDQ8NI38 313 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 CYTH4Q9UIA0 394 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 CDH22Q9UJ99 828 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 C2orf92A0A1B0GVN3 265 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 M0R2N6 131 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 DNM1LO00429 736 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 SLC7A4O43246 635 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 CDH1P12830 882 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 HOXB6P17509 224 aaKnown RBP10.71□□□□□ -0.69
TRIM41-209ENST00000515834 FMO3P31513 532 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 UQCRC1P31930 480 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 CDK10Q15131 360 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 EIF2S3LQ2VIR3 472 aaKnown RBP10.71□□□□□ -0.69
TRIM41-209ENST00000515834 GALNT11Q8NCW6 608 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 FN3KQ9H479 309 aa10.71□□□□□ -0.69
TRIM41-209ENST00000515834 APOBEC3GQ9HC16 384 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms