RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 LHPPQ9H008 270 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 DRC3Q9H069 523 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 ILKAPQ9H0C8 392 aaPredicted RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PCBD2Q9H0N5 130 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 MKKSQ9NPJ1 570 aaPredicted RBP9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 TMEM184CQ9NVA4 438 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PYCARDQ9ULZ3 195 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 PCDHGA10Q9Y5H3 936 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 LRRK2Q5S007 2527 aa9.94□□□□□ -0.82
HMGXB3-205ENST00000514469 KCNE1BA0A087WTH5 132 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 A0A0A6YYC8 382 aaPredicted RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 CYSRT1A8MQ03 144 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 IDSB3KWA1 339 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 TCP11X1B4DZS4 312 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 E7ESA3 106 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 I3L1I5 382 aaPredicted RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 FFAR3O14843 346 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 PCDH17O14917 1159 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 GPR42O15529 346 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 ANXA5P08758 320 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 COX6A1P12074 109 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 CCND1P24385 295 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 ARL4CP56559 192 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 IL2P60568 153 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 CSNK1G2P78368 415 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 PDAP1Q13442 181 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 FAM53BQ14153 422 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 NDUFA9Q16795 377 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 HP1BP3Q5SSJ5 553 aaPredicted RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 AGAP7PQ5VUJ5 663 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 FAM45BPQ6NSW5 357 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 LCTLQ6UWM7 567 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 CUZD1Q86UP6 607 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 ZC3H7AQ8IWR0 971 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 PALM2Q8IXS6 379 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 ZADH2Q8N4Q0 377 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 GPATCH11Q8N954 259 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 FAM45AQ8TCE6 357 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 C8orf44Q96CB5 159 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 SNRNP40Q96DI7 357 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 THAP11Q96EK4 314 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 MMABQ96EY8 250 aaPredicted RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 AGAP4Q96P64 663 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 OLFM1Q99784 485 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 SLC29A3Q9BZD2 475 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 ATG10Q9H0Y0 220 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 ZNF160Q9HCG1 818 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 PPANQ9NQ55 473 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 TRPC4Q9UBN4 977 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 MRPS2Q9Y399 296 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 CSAG2Q9Y5P2 127 aa9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 USP9XQ93008 2570 aaPredicted RBP9.93□□□□□ -0.82
HMGXB3-205ENST00000514469 MED13Q9UHV7 2174 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 H0YIG0 161 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 NSA2O95478 260 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 STATHP02808 62 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 ENO2P09104 434 aaPredicted RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 CDH1P12830 882 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 BCL6P41182 706 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 PAFAH1B1P43034 410 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 EFNA3P52797 238 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 PGGT1BP53609 377 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 AP1S2P56377 157 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 CBLBQ13191 982 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 NAE1Q13564 534 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 FASTKD3Q14CZ7 662 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 PPP1R3AQ16821 1122 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 SYT16Q17RD7 645 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 ZXDCQ2QGD7 858 aaPredicted RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 IRAK1BP1Q5VVH5 260 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 DUPD1Q68J44 220 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 CAPN13Q6MZZ7 669 aaPredicted RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 TMEM214Q6NUQ4 689 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 NDUFAF7Q7L592 441 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 PRSS41Q7RTY9 318 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 C17orf64Q86WR6 236 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 PARP9Q8IXQ6 854 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 FBXO36Q8NEA4 188 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 OR56A3Q8NH54 315 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 ANP32BQ92688 251 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 TM4SF19Q96DZ7 209 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 C19orf60Q96EN9 201 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 THOC3Q96J01 351 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 BARD1Q99728 777 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 ZFATQ9P243 1243 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 RNF14Q9UBS8 474 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 PSAT1Q9Y617 370 aa9.92□□□□□ -0.82
HMGXB3-205ENST00000514469 LOC102723996A0A087X1L8 192 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 IGHV1-45A0A0A0MS14 117 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 NSG1A0A0A6YYJ2 146 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 FEZF1A0PJY2 475 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 EFCAB8A8MWE9 144 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 NDC80O14777 642 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 HEXBP07686 556 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 CYC1P08574 325 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 HIST1H2AGP0C0S8 130 aaPredicted RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 PRR35P0CG20 571 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 NPPBP16860 134 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms