RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	AKR1D1	P51857	326 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	TWF1	Q12792	350 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	RPA4	Q13156	261 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ASAH1	Q13510	395 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	CAMK2G	Q13555	558 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	WSCD2	Q2TBF2	565 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	RUNDC3A	Q59EK9	446 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	C10orf120	Q5SQS8	335 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	FAM171A1	Q5VUB5	890 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ANKS6	Q68DC2	871 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	GPRIN1	Q7Z2K8	1008 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	VTCN1	Q7Z7D3	282 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	DPP10	Q8N608	796 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLC37A3	Q8NCC5	494 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF431	Q8TF32	576 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLC16A10	Q8TF71	515 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	TMEM40	Q8WWA1	233 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ST8SIA4	Q92187	359 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	FAM120B	Q96EK7	910 aa	Known RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	MRGPRX2	Q96LB1	330 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SIGLEC11	Q96RL6	698 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	USB1	Q9BQ65	265 aa	Known RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	OLA1	Q9NTK5	396 aa	Known RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	MGAT4A	Q9UM21	535 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	AAR2	Q9Y312	384 aa	Known RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	KCTD3	Q9Y597	815 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	PCDHGA6	Q9Y5G7	932 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	NUP214	P35658	2090 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	URB1	O60287	2271 aa	Known RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	CLCA1	A8K7I4	914 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	LINC01387	J3KSC0	135 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	MYL12B	O14950	172 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	PLA2G10	O15496	165 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SCEL	O95171	688 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	MYL12A	P19105	171 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	HLA-DMA	P28067	261 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	PBX3	P40426	434 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SOX3	P41225	446 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	COL9A2	Q14055	689 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF284	Q2VY69	593 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SPOUT1	Q5T280	376 aa	Known RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	OTUD1	Q5VV17	481 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	IL27RA	Q6UWB1	636 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	OTOP2	Q7RTS6	562 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	MGLL	Q99685	303 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	CCM2	Q9BSQ5	444 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	COLEC11	Q9BWP8	271 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	RACGAP1	Q9H0H5	632 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	TREX1	Q9NSU2	369 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	MRPL39	Q9NYK5	338 aa	Known RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	RDH8	Q9NYR8	311 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF225	Q9UK10	706 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	NEUROG3	Q9Y4Z2	214 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	COL11A2	P13942	1736 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	FAM240B	A0A1B0GVZ2	78 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	PRR23A	A6NEV1	266 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZBTB42	B2RXF5	422 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	WWP2	O00308	870 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	GFRA2	O00451	464 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	NPPA	P01160	153 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	CPN2	P22792	545 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	HTR6	P50406	440 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	CPT1A	P50416	773 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SMS	P52788	366 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ARHGAP1	Q07960	439 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ANGPTL8	Q6UXH0	198 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	DENND1C	Q8IV53	801 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	LIX1L	Q8IVB5	337 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	DNAJC22	Q8N4W6	341 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	OR8J3	Q8NGG0	315 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLC13A3	Q8WWT9	602 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	CCDC115	Q96NT0	180 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	EGFL8	Q99944	293 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SPNS1	Q9H2V7	528 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	ACTL8	Q9H568	366 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLC6A13	Q9NSD5	602 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLC25A37	Q9NYZ2	338 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	CMAHP	Q9Y471	501 aa		10.8	□□□□□ -0.68
PDCD6-210	ENST00000513582	PI15	O43692	258 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	RFPL3	O75679	317 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ATN1	P54259	1190 aa	Predicted RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	C10orf62	Q5T681	223 aa	Predicted RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	CHMP1B	Q7LBR1	199 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ANKRD46	Q86W74	232 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	FCRL2	Q96LA5	508 aa	Predicted RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	TINF2	Q9BSI4	451 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	RGS17	Q9UGC6	210 aa	Predicted RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	KIAA0100	Q14667	2235 aa	Known RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	LOC102723532	A0A0G2JNH3	316 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	PSIP1	O75475	530 aa	Known RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	RHOBTB1	O94844	696 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	PRR35	P0CG20	571 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	MAN2A2	P49641	1150 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ARSD	P51689	593 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	PSPH	P78330	225 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	CYP4F8	P98187	520 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	LARS2	Q15031	903 aa	Known RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms