RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CIB1Q99828 191 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 MAN2C1Q9NTJ4 1040 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 A4GNTQ9UNA3 340 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 SORCS3Q9UPU3 1222 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 PUS1Q9Y606 427 aaKnown RBP eCLIP6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 RGPD2P0DJD1 1756 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 GOLGA6L4A6NEF3 574 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 GPAA1O43292 621 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 LRP3O75074 770 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 ATP9AO75110 1047 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 ZNF217O75362 1048 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 CREG1O75629 220 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 BCAR3O75815 825 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 RHOBTB1O94844 696 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 POMCP01189 267 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 APOA1P02647 267 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 PROS1P07225 676 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 PLA2G4BP0C869 781 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 F3P13726 295 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 HOXB8P17481 243 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 ITGAXP20702 1163 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 HLA-FP30511 346 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 PRDX2P32119 198 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 CD80P33681 288 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 EGR4Q05215 589 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 BFSP2Q13515 415 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 SKIDA1Q1XH10 827 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 ADPRMQ3LIE5 342 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 XKR4Q5GH76 650 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 TMIGD1Q6UXZ0 262 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 C8orf86Q6ZUL3 223 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 KCTD8Q6ZWB6 473 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 BMP8AQ7Z5Y6 402 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 FRMD5Q7Z6J6 570 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 GPAT4Q86UL3 456 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 CYB561A3Q8NBI2 242 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 SLC35B2Q8TB61 432 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 GPX8Q8TED1 209 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 SLCO2A1Q92959 643 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 LINGO1Q96FE5 620 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 DYDC2Q96IM9 177 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 TMPRSS13Q9BYE2 586 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 PKIBQ9C010 78 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 EPC1Q9H2F5 836 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 AUNIPQ9H7T9 357 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 GPR35Q9HC97 309 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 ZDHHC4Q9NPG8 344 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 BABAM1Q9NWV8 329 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 ATXN10Q9UBB4 475 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 SNX7Q9UNH6 387 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 KLK4Q9Y5K2 254 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 RGPD5Q99666 1765 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 ABCA3Q99758 1704 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 LMO7Q8WWI1 1683 aa6.04□□□□□ -1.44
TRAPPC11-209ENST00000512476 ROBO1Q9Y6N7 1651 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 C13orf42A0A1B0GVH6 325 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 FBLL1A6NHQ2 334 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 DBX1A6NMT0 343 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 FCMRO60667 390 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 UPK3AO75631 287 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 CABYRO75952 493 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 VAMP5O95183 116 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 RAP2AP10114 183 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 IGHMBP2P38935 993 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 ARRB1P49407 418 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 PGDP52209 483 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 RAB11AP62491 216 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 ACSM2AQ08AH3 577 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 NFATC3Q12968 1075 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 PMS2P3Q13401 168 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 TNK1Q13470 666 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 DYRK1AQ13627 763 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 SELPLGQ14242 412 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 DRAP1Q14919 205 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 RNPS1Q15287 305 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 RAB11BQ15907 218 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 MAPK6Q16659 721 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 CDONQ4KMG0 1287 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 GPR157Q5UAW9 335 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 ACSM2BQ68CK6 577 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 TXNDC8Q6A555 127 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 HMBOX1Q6NT76 420 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 TUBA3EQ6PEY2 450 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 SIGLEC15Q6ZMC9 328 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 TPGS1Q6ZTW0 290 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 DCXRQ7Z4W1 244 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 SIAH3Q8IW03 269 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 LRRC75A-AS1Q8N1F1 130 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 MBD3L2Q8NHZ7 208 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 DTX3LQ8TDB6 740 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 WIPF2Q8TF74 440 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 ZNF480Q8WV37 535 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 ATL1Q8WXF7 558 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 RPL3LQ92901 407 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 DUS3LQ96G46 650 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 LIN37Q96GY3 246 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 MUS81Q96NY9 551 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 NACC1Q96RE7 527 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 PAAF1Q9BRP4 392 aa6.03□□□□□ -1.44
TRAPPC11-209ENST00000512476 GTPBP2Q9BX10 602 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms