RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 PDCD4Q53EL6 469 aaKnown RBP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 FBXO48Q5FWF7 155 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 XKR6Q5GH73 641 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 TMEM31Q5JXX7 168 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 C6orf136Q5SQH8 315 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 TPRG1LQ5T0D9 272 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 MED27Q6P2C8 311 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 IYDQ6PHW0 289 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 IL27RAQ6UWB1 636 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 DNAJC14Q6Y2X3 702 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 BMP8AQ7Z5Y6 402 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 ZFAND4Q86XD8 727 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 NRROSQ86YC3 692 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 HID1Q8IV36 788 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 KRT78Q8N1N4 520 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 ARHGAP24Q8N264 748 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 MIER2Q8N344 545 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 TBC1D19Q8N5T2 526 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 GLB1L3Q8NCI6 653 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 OR4K1Q8NGD4 311 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 WDR20Q8TBZ3 569 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 GAB3Q8WWW8 586 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 RLN3Q8WXF3 142 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 STARD8Q92502 1023 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 SNX19Q92543 992 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 NEIL2Q969S2 332 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 PMEPA1Q969W9 287 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 KLHL29Q96CT2 875 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 CXorf40BQ96DE9 158 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 CMTM7Q96FZ5 175 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 FCRL1Q96LA6 429 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 C3orf30Q96M34 536 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 HSPA12BQ96MM6 686 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 SLC6A18Q96N87 628 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 RAB3IPQ96QF0 476 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 FERD3LQ96RJ6 166 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 KCNA7Q96RP8 456 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 RTKNQ9BST9 563 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 SLC25A23Q9BV35 468 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 ATG10Q9H0Y0 220 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 TM9SF3Q9HD45 589 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 CD320Q9NPF0 282 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 ACSS2Q9NR19 701 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 IMP3Q9NV31 184 aaKnown RBP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 AIG1Q9NVV5 245 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 SPATA6Q9NWH7 488 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 C1orf109Q9NX04 203 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 ANKMY1Q9P2S6 941 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 TBC1D29Q9UFV1 150 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 APOBEC3BQ9UH17 382 aaKnown RBP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 ZNF490Q9ULM2 529 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-230ENST00000511944 PSMD13Q9UNM6 376 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 WDR37Q9Y2I8 494 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 RNF11Q9Y3C5 154 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 TIMM22Q9Y584 194 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 PCDHGA2Q9Y5H1 932 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 KLK4Q9Y5K2 254 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 CSNK1G3Q9Y6M4 447 aa8.77□□□□□ -1.01
NR1I3-230ENST00000511944 LRP4O75096 1905 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 A0A1W2PPV9 198 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 E7EQ34 232 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 PSMD12O00232 456 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-230ENST00000511944 GNB5O14775 395 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 YKT6O15498 198 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 PRICKLE3O43900 615 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-230ENST00000511944 DFNA5O60443 496 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 LINC00032P0C843 101 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 PRPS2P11908 318 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 JAK1P23458 1154 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 ITPKAP23677 461 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 PIK3R1P27986 724 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 GSTM5P46439 218 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 C21orf58P58505 322 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 UBE2IP63279 158 aaKnown RBP8.76□□□□□ -1.01
NR1I3-230ENST00000511944 PRDX1Q06830 199 aaKnown RBP8.76□□□□□ -1.01
NR1I3-230ENST00000511944 SF3A3Q12874 501 aaKnown RBP eCLIP8.76□□□□□ -1.01
NR1I3-230ENST00000511944 CYLC2Q14093 348 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-230ENST00000511944 CLCA4Q14CN2 919 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 ABRAXAS2Q15018 415 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 CPSF6Q16630 551 aaKnown RBP eCLIP8.76□□□□□ -1.01
NR1I3-230ENST00000511944 IMPG1Q17R60 797 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 DPY19L1Q2PZI1 675 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 SPIN4Q56A73 249 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 CACHD1Q5VU97 1274 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 PMS2CLQ68D20 193 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 GALNT18Q6P9A2 607 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 NXPE4Q6UWF7 544 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 HACD2Q6Y1H2 254 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 Q6ZSR9 355 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 SLC9B2Q86UD5 537 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 GKN2Q86XP6 184 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 FAM129CQ86XR2 697 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 GALNT12Q8IXK2 581 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 SFRP1Q8N474 314 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 OR52E1Q8NGJ3 308 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 DNAJB8Q8NHS0 232 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 SELENOMQ8WWX9 145 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 NELL1Q92832 810 aa8.76□□□□□ -1.01
NR1I3-230ENST00000511944 TSACCQ96A04 125 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms