RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	KANK2	Q63ZY3	851 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	FCRL6	Q6DN72	434 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	MED27	Q6P2C8	311 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	KMT5C	Q86Y97	462 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	LAS2	Q8IYD9	372 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	TBC1D19	Q8N5T2	526 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	C19orf47	Q8N9M1	422 aa	Known RBP	11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	DEFB124	Q8NES8	71 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	METTL6	Q8TCB7	284 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	REPS1	Q96D71	796 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	FAR2	Q96K12	515 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	KCNA7	Q96RP8	456 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	CHRNA10	Q9GZZ6	450 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	SPNS1	Q9H2V7	528 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	SYNDIG1	Q9H7V2	258 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	PNPO	Q9NVS9	261 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	TMEM9	Q9P0T7	183 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	KLHL3	Q9UH77	587 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	SNX6	Q9UNH7	406 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	KLHL20	Q9Y2M5	609 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	TSC22D4	Q9Y3Q8	395 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	PCDHGA11	Q9Y5H2	935 aa		11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	PTPRZ1	P23471	2315 aa	Predicted RBP	11.48	□□□□□ -0.57
RACK1-223	ENST00000510199	GVINP1	Q7Z2Y8	2422 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	CROCC	Q5TZA2	2017 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	IGHV5-51	A0A0C4DH38	117 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	GMNC	A6NCL1	334 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	SRRM3	A6NNA2	597 aa	Predicted RBP	11.47	□□□□□ -0.57
RACK1-223	ENST00000510199		D6RAR5	112 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	SLCO1B7	G3V0H7	640 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	TM4SF5	O14894	197 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	HAT1	O14929	419 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	MAP3K7	O43318	606 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	SHOX2	O60902	331 aa	Predicted RBP	11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	RASSF9	O75901	435 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	CHEK2	O96017	543 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	KRT6A	P02538	564 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	KRT6B	P04259	564 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	ANKRD34C	P0C6C1	535 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	THRA	P10827	490 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	CDK4	P11802	303 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	GSTM2	P28161	218 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	KRT6C	P48668	564 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	RPS15A	P62244	130 aa	Known RBP	11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	ZNF33B	Q06732	778 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	ZRSR2	Q15696	482 aa	Known RBP	11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	UGT3A2	Q3SY77	523 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	C10orf62	Q5T681	223 aa	Predicted RBP	11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	CLEC6A	Q6EIG7	209 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	TMIGD1	Q6UXZ0	262 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	RNF165	Q6ZSG1	346 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	RNF44	Q7L0R7	432 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	TMPRSS9	Q7Z410	1059 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	WDR75	Q8IWA0	830 aa	Known RBP	11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	LRRC34	Q8IZ02	419 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	ZNF740	Q8NDX6	193 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	TTL	Q8NG68	377 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	OR7G3	Q8NG95	312 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	WDR20	Q8TBZ3	569 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	AGR3	Q8TD06	166 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	KLHL6	Q8WZ60	621 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	CHMP6	Q96FZ7	201 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	TCTN2	Q96GX1	697 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	KLHL25	Q9H0H3	589 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	ZNF768	Q9H5H4	540 aa	Known RBP	11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	FGFR1OP2	Q9NVK5	253 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	TOR4A	Q9NXH8	423 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	VTI1B	Q9UEU0	232 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	ADGRE2	Q9UHX3	823 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	PILRA	Q9UKJ1	303 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	BTRC	Q9Y297	605 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	FIS1	Q9Y3D6	152 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	TIMM22	Q9Y584	194 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	KNTC1	P50748	2209 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	SCN2A	Q99250	2005 aa		11.47	□□□□□ -0.57
RACK1-223	ENST00000510199	IGHV5-10-1	A0A0J9YXX1	117 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	FEZF1	A0PJY2	475 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SERTM1	A2A2V5	107 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	TMEM233	B4DJY2	109 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	MANBA	O00462	879 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	FFAR3	O14843	346 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SLC30A4	O14863	429 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	GPR42	O15529	346 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	OR1F1	O43749	312 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	LCMT2	O60294	686 aa	Known RBP	11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	NRP2	O60462	931 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	ULK1	O75385	1050 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	TGDS	O95455	350 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	KIT	P10721	976 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SERPINB3	P29508	390 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SERPINB1	P30740	379 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	AHR	P35869	848 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SCTR	P47872	440 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	HSD11B2	P80365	405 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	IFT88	Q13099	833 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.46	□□□□□ -0.57	2e-50	■■■■■ 46.9
RACK1-223	ENST00000510199	RBBP5	Q15291	538 aa	Known RBP	11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	ZIC1	Q15915	447 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms