RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PCM1Q15154 2024 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 MDC1Q14676 2089 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 ANKRD12Q6UB98 2062 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 LRRC14BA6NHZ5 514 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 MASP2O00187 686 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 FFAR3O14843 346 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 NKX2-8O15522 239 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 GPR42O15529 346 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 RIPK2O43353 540 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 SHBGP04278 402 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 TUBB4AP04350 444 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 MTHFD2P13995 350 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 EDN3P14138 238 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 CD22P20273 847 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 CD82P27701 267 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 STX2P32856 288 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 CCNFP41002 786 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 BCL6P41182 706 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 CSNK1G2P78368 415 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 ACY1Q03154 408 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 PRKAA1Q13131 559 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 PWP1Q13610 501 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 MAP7Q14244 749 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 IL11RAQ14626 422 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 SLC9A5Q14940 896 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 SLMAPQ14BN4 828 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 HKDC1Q2TB90 917 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 PRTGQ2VWP7 1150 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 LINC00303Q3SY05 128 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 SOWAHCQ53LP3 525 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 ARHGAP40Q5TG30 622 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 C1orf189Q5VU69 101 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 PRAMEF13Q5VWM6 474 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 FBXO42Q6P3S6 717 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 KLHL35Q6PF15 583 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 FIGLAQ6QHK4 219 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 AGTRAPQ6RW13 159 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 PRSS41Q7RTY9 318 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 PPP1R3BQ86XI6 285 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 CTAGE3PQ8IX95 158 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 DSELQ8IZU8 1212 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 NLGN4XQ8N0W4 816 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 MYO1HQ8N1T3 1032 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 METTL27Q8N6F8 245 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 CEP112Q8N8E3 955 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 ZNF740Q8NDX6 193 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 NLGN4YQ8NFZ3 816 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 KCTD4Q8WVF5 259 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 ESAMQ96AP7 390 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 FBXL8Q96CD0 374 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 RHOVQ96L33 236 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 OR2A5Q96R48 311 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 ATOH8Q96SQ7 321 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 PAFAH2Q99487 392 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 MACROD1Q9BQ69 325 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 PLCD4Q9BRC7 762 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 DPH7Q9BTV6 452 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 RAB11FIP5Q9BXF6 653 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 GSX2Q9BZM3 304 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 DERL2Q9GZP9 239 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 ATG10Q9H0Y0 220 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 CHST8Q9H2A9 424 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 CCDC68Q9H2F9 335 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 RUBCNLQ9H714 662 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 POPDC3Q9HBV1 291 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 LHX9Q9NQ69 397 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 SNX15Q9NRS6 342 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 DHCR7Q9UBM7 475 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 RARRES3Q9UL19 164 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 SLC39A10Q9ULF5 831 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 NUP210LQ5VU65 1888 aa6.89□□□□□ -1.31
TOPBP1-207ENST00000509162 A0A0J9YVX5 310 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 FITM1A5D6W6 292 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 NDC80O14777 642 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 SLC16A5O15375 505 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ZW10O43264 779 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ZNF749O43361 778 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 DNAJB6O75190 326 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 GUCA1CO95843 209 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 SYF2O95926 243 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 B3GALT4O96024 378 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 RPN2P04844 631 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 C8GP07360 202 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ABHD2P08910 425 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 FAM157BP0CG42 384 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 CDH1P12830 882 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 TNFRSF8P28908 595 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 GDF5P43026 501 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 AGTR2P50052 363 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ITGA1P56199 1179 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 TMPRSS3P57727 454 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 RAB10P61026 200 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 REEP5Q00765 189 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 POU4F1Q01851 419 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 MEF2AQ02078 507 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 ABHD18Q0P651 414 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 NAB1Q13506 487 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 NAE1Q13564 534 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 DNASE1L3Q13609 305 aa6.88□□□□□ -1.31
TOPBP1-207ENST00000509162 UBAP2LQ14157 1087 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms