RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 ZFR2Q9UPR6 939 aaKnown RBP3.8□□□□□ -1.8
ATP2C1-213ENST00000508297 TNNQ9UQP3 1299 aa3.8□□□□□ -1.8
ATP2C1-213ENST00000508297 PHLPP1O60346 1717 aa3.8□□□□□ -1.8
ATP2C1-213ENST00000508297 ABCC1P33527 1531 aa3.8□□□□□ -1.8
ATP2C1-213ENST00000508297 BLMP54132 1417 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 TNRQ92752 1358 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 A0A1W2PPC1 479 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 GAGE12BA1L429 117 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 GAGE12HA6NDE8 117 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 LINC00473A8K010 186 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 FOXN1O15353 648 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 SMAD6O43541 496 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 KIF1CO43896 1103 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 ACSL4O60488 711 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 CIB2O75838 187 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 DDNO94850 711 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 C9P02748 559 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 PROS1P07225 676 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 CA3P07451 260 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 TPM1P09493 284 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 EPCAMP16422 314 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 CKMT2P17540 419 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 CHATP28329 748 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MARCKSP29966 332 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 FCGR2BP31994 310 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 CA8P35219 290 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 NKX2-1P43699 371 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 NSFP46459 744 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 SLC1A6P48664 564 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 SLC9A3P48764 834 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 CLDN15P56746 228 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 FKBP1BP68106 108 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MAD2L1Q13257 205 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MSLNQ13421 630 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 ARHGAP19Q14CB8 494 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 KRT31Q15323 416 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 BCL7AQ4VC05 210 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 PLAC9Q5JTB6 97 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MIIPQ5JXC2 388 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 RABGAP1LQ5R372 815 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 C6orf10Q5SRN2 563 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 LYSMD4Q5XG99 296 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 KIAA0895LQ68EN5 471 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 DUS1LQ6P1R4 473 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 TMEM71Q6P5X7 295 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 VSTM1Q6UX27 236 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 ZNF704Q6ZNC4 412 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 ANKRD33Q7Z3H0 272 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 PHLDB2Q86SQ0 1253 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 ZDHHC17Q8IUH5 632 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 FOXRED2Q8IWF2 684 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 UEVLDQ8IX04 471 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MB21D2Q8IYB1 491 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 TDHQ8IZJ6 230 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 THEM5Q8N1Q8 247 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 LCORLQ8N3X6 602 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 BBOF1Q8ND07 529 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 PAPD5Q8NDF8 572 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 C17orf47Q8NEP4 570 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MIPOL1Q8TD10 442 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 SLC25A43Q8WUT9 341 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 PROX1Q92786 737 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 HAS2Q92819 552 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 KAT2BQ92831 832 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MCHR2Q969V1 340 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 LRR1Q96L50 414 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 CCDC17Q96LX7 622 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 GPA33Q99795 319 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 AIFM2Q9BRQ8 373 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 FICDQ9BVA6 458 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MRPL13Q9BYD1 178 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 NMNAT2Q9BZQ4 307 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 TM6SF1Q9BZW5 370 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 SEMA6AQ9H2E6 1030 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MED20Q9H944 212 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MOV10Q9HCE1 1003 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 HHATLQ9HCP6 504 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 PTTG2Q9NZH5 202 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 NPAP1Q9NZP6 1156 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MALT1Q9UDY8 824 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 UTS2RQ9UKP6 389 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 TTC7AQ9ULT0 858 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 PCDHA7Q9UN72 937 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 TRAF3IP3Q9Y228 551 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MRPS2Q9Y399 296 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 NHSL1Q5SYE7 1610 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 FAM135AQ9P2D6 1515 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 NUP153P49790 1475 aaKnown RBP3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 LRRC9Q6ZRR7 1453 aa3.79□□□□□ -1.8
ATP2C1-213ENST00000508297 MIA2Q96PC5 1412 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 IQGAP1P46940 1657 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 COL16A1Q07092 1604 aaPredicted RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 ABCA6Q8N139 1617 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SF3B1O75533 1304 aaKnown RBP eCLIP3.78□□□□□ -1.83e-6■■■■■ 44.6
ATP2C1-213ENST00000508297 NWD1Q149M9 1564 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 HELTA6NFD8 242 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 FAM90A26D6RGX4 464 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms