RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CAPRIN1Q14444 709 aaKnown RBP6.74□□□□□ -1.33
VCAN-207ENST00000507162 FBXL19-AS1Q494R0 122 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 SFT2D3Q587I9 215 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 HSP90AA4PQ58FG1 418 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 LRRC8BQ6P9F7 803 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 PAPD4Q6PIY7 484 aaKnown RBP6.74□□□□□ -1.33
VCAN-207ENST00000507162 SHISA5Q8N114 240 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 KIF2BQ8N4N8 673 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 MEIOBQ8N635 442 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 LINC01555Q8NAE3 123 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 SLC22A18Q96BI1 424 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 ZBED6CLQ96FA7 236 aaPredicted RBP6.74□□□□□ -1.33
VCAN-207ENST00000507162 IMP4Q96G21 291 aaKnown RBP6.74□□□□□ -1.33
VCAN-207ENST00000507162 SPATA13Q96N96 652 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 DACH2Q96NX9 599 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 IL17FQ96PD4 163 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 AGPAT1Q99943 283 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 REG4Q9BYZ8 158 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 GSX2Q9BZM3 304 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 SPTLC3Q9NUV7 552 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 SMOXQ9NWM0 555 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 C6orf203Q9P0P8 240 aaPredicted RBP6.74□□□□□ -1.33
VCAN-207ENST00000507162 DRG1Q9Y295 367 aaKnown RBP6.74□□□□□ -1.33
VCAN-207ENST00000507162 LIPGQ9Y5X9 500 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 SVEP1Q4LDE5 3571 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 HEATR5AQ86XA9 2040 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 ATP6AP2A0A1C7CYW4 349 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 SH3D21A4FU49 640 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 GOLGA6L4A6NEF3 574 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 TARM1B6A8C7 271 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 H0YGG7 62 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 ACOT7O00154 380 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 FCHO1O14526 889 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 NRP2O60462 931 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 ATP6AP2O75787 350 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 SRP72O76094 671 aaKnown RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 S1PR4O95977 384 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 CD48P09326 243 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 GABRA1P14867 456 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 ACADLP28330 430 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 SOX18P35713 384 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 SSR1P43307 286 aaKnown RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 TNNT3P45378 269 aaPredicted RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 MAN2A2P49641 1150 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 WNT3P56703 355 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 MLF1P58340 268 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 ARF3P61204 181 aaPredicted RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 DEFA6Q01524 100 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 PAFAH1B3Q15102 231 aaKnown RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 CLEC12BQ2HXU8 276 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 CCDC183Q5T5S1 534 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 UBAP2Q5T6F2 1119 aaKnown RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 NCBP2-AS2Q69YL0 99 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 FBXO42Q6P3S6 717 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 TRILQ7L0X0 811 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 MDGA2Q7Z553 956 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 CYP4X1Q8N118 509 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 TMEM156Q8N614 296 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 NAXEQ8NCW5 288 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 TNIP2Q8NFZ5 429 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 OR5K2Q8NHB8 316 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 CFAP61Q8NHU2 1237 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 SMPDL3BQ92485 455 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 FATE1Q969F0 183 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 SARAFQ96BY9 339 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 LCORQ96JN0 433 aaPredicted RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 COPS8Q99627 209 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 LPAR4Q99677 370 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 MIPEPQ99797 713 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 SLC25A51Q9H1U9 297 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 TRIM45Q9H8W5 580 aaPredicted RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 VPS37BQ9H9H4 285 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 ENAMQ9NRM1 1142 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 TRMT1Q9NXH9 659 aaKnown RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 FKBPLQ9UIM3 349 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 RUVBL1Q9Y265 456 aaKnown RBP6.73□□□□□ -1.33
VCAN-207ENST00000507162 WNK1Q9H4A3 2382 aa6.73□□□□□ -1.33
VCAN-207ENST00000507162 PINLYPA6NC86 204 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 G3V3Y1 287 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 CDK2AP1O14519 115 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 AQP7O14520 342 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 FOXS1O43638 330 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 IL2RAP01589 272 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 CD9P21926 228 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 PKLRP30613 574 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 TRHRP34981 398 aaPredicted RBP6.72□□□□□ -1.33
VCAN-207ENST00000507162 PCK1P35558 622 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 KLK7P49862 253 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 AGTR2P50052 363 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 CSE1LP55060 971 aaKnown RBP6.72□□□□□ -1.33
VCAN-207ENST00000507162 WNT3AP56704 352 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 OR4D2P58180 307 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 SORDQ00796 357 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 GBE1Q04446 702 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 SLC10A2Q12908 348 aaPredicted RBP6.72□□□□□ -1.33
VCAN-207ENST00000507162 USP10Q14694 798 aaKnown RBP6.72□□□□□ -1.33
VCAN-207ENST00000507162 SLC10A1Q14973 349 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 NSDHLQ15738 373 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 TYSND1Q2T9J0 566 aa6.72□□□□□ -1.33
VCAN-207ENST00000507162 HKDC1Q2TB90 917 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms