RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 DEFB132Q7Z7B7 95 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 PIGZQ86VD9 579 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 VSIG1Q86XK7 387 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 NDUFAF2Q8N183 169 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 GPRC5AQ8NFJ5 357 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 OR4C3Q8NH37 302 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SETD6Q8TBK2 473 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 ANKRD9Q96BM1 317 aaPredicted RBP3.13□□□□□ -1.91
SSBP2-206ENST00000506960 CENPTQ96BT3 561 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 FAM71F1Q96KD3 344 aaPredicted RBP3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SPATA17Q96L03 361 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 ASCL2Q99929 193 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 MGME1Q9BQP7 344 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SLC2A11Q9BYW1 496 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 FZD8Q9H461 694 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 ST6GALNAC4Q9H4F1 302 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 EPHA6Q9UF33 1036 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 GIMAP2Q9UG22 337 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 WDR83OSQ9Y284 106 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 MRPS28Q9Y2Q9 187 aaKnown RBP3.13□□□□□ -1.91
SSBP2-206ENST00000506960 TRIM17Q9Y577 477 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 LIPGQ9Y5X9 500 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 NLRP1Q9C000 1473 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SLIT1O75093 1534 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 SHANK3Q9BYB0 1731 aa3.13□□□□□ -1.91
SSBP2-206ENST00000506960 UNC13BO14795 1591 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 TROQ12816 1431 aaPredicted RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 CROCC2H7BZ55 1655 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 NKTRP30414 1462 aaKnown RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 ARHGAP23Q9P227 1491 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 IGHV4-4A0A075B6R2 117 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 NR5A2O00482 541 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 KLF11O14901 512 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 EPHB6O15197 1021 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 SNX3O60493 162 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 CRLF1O75462 422 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 CSN3P07498 182 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 QDPRP09417 244 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 EPCAMP16422 314 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 SP100P23497 879 aaPredicted RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 ACAT1P24752 427 aaKnown RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 PRKCIP41743 596 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 ALDH3A2P51648 485 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 CAPZA1P52907 286 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 LIMK1P53667 647 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 MAZP56270 477 aaKnown RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 HERV-K104P61576 105 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 DLK1P80370 383 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 SP3Q02447 781 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 HERC3Q15034 1050 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 NONOQ15233 471 aaKnown RBP eCLIP3.12□□□□□ -1.916e-7■■■■□ 25.1
SSBP2-206ENST00000506960 LRRC73Q5JTD7 316 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 LCN1P1Q5VSP4 162 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 ANKRD13CQ8N6S4 541 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 KLHDC1Q8N7A1 406 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 RASGEF1AQ8N9B8 481 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 NOA1Q8NC60 698 aaKnown RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 Q8NFD4 153 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 OR10Q1Q8NGQ4 319 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 OR2T11Q8NH01 316 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 SPATA33Q96N06 139 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 ZMAT2Q96NC0 199 aaKnown RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 EGFL8Q99944 293 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 KATNB1Q9BVA0 655 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 OR2B2Q9GZK3 357 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 ZMYND12Q9H0C1 365 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 FAM49AQ9H0Q0 323 aaPredicted RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 SNX25Q9H3E2 840 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 TRPV4Q9HBA0 871 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 GRID1Q9ULK0 1009 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 NRAPQ86VF7 1730 aa3.12□□□□□ -1.91
SSBP2-206ENST00000506960 XRN1Q8IZH2 1706 aaKnown RBP3.12□□□□□ -1.91
SSBP2-206ENST00000506960 COL22A1Q8NFW1 1626 aaPredicted RBP3.11□□□□□ -1.91
SSBP2-206ENST00000506960 TET3O43151 1660 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 CAMSAP2Q08AD1 1489 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 CASZ1Q86V15 1759 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 ADGRB3O60242 1522 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 A0A087X002 238 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 KRTAP16-1A8MUX0 517 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 PSMD14O00487 310 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 DFFBO76075 338 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 DDHD2O94830 711 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 LUC7L3O95232 432 aaKnown RBP3.11□□□□□ -1.91
SSBP2-206ENST00000506960 NADKO95544 446 aaPredicted RBP3.11□□□□□ -1.91
SSBP2-206ENST00000506960 GSRP00390 522 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 IGLV1-44P01699 117 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 STAG3L1P0CL83 205 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 CEACAM1P13688 526 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 PDGFRAP16234 1089 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 LHCGRP22888 699 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 HSD17B3P37058 310 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 GCNT1Q02742 428 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 ILF2Q12905 390 aaKnown RBP3.11□□□□□ -1.91
SSBP2-206ENST00000506960 ZNF273Q14593 569 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 SPECC1Q5M775 1068 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 OR4A47Q6IF82 309 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 CTR9Q6PD62 1173 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 MOXD1Q6UVY6 613 aa3.11□□□□□ -1.91
SSBP2-206ENST00000506960 PET117Q6UWS5 81 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms