RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SPNS1Q9H2V7 528 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 NT5DC2Q9H857 520 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 IPPKQ9H8X2 491 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 ASCL3Q9NQ33 180 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 GEMIN8Q9NWZ8 242 aaKnown RBP12.3□□□□□ -0.44
TCOF1-210ENST00000506767 RARRES3Q9UL19 164 aa12.3□□□□□ -0.44
TCOF1-210ENST00000506767 MAP1BP46821 2468 aaKnown RBP12.3□□□□□ -0.44
TCOF1-210ENST00000506767 KNTC1P50748 2209 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 LOC105369274A0A096LPK9 316 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 LOC102723532A0A0G2JNH3 316 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 A0A0J9YVX5 310 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 TRBC2A0A5B9 178 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 FEZF1A0PJY2 475 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 TMEM150CB9EJG8 249 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 OR7A17O14581 309 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 NVLO15381 856 aaKnown RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 KATNA1O75449 491 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 ZWINTO95229 277 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 DHRS4L1P0CG22 281 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 CD22P20273 847 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 ALDH3A1P30838 453 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 GRK3P35626 688 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 GCGRP47871 477 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 NAA20P61599 178 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 RPS15AP62244 130 aaKnown RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 MEF2AQ02078 507 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 CHIT1Q13231 466 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 DOC2AQ14183 400 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 DCAF12Q5T6F0 453 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 LIPMQ5VYY2 423 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 CEACAM20Q6UY09 585 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 RPS27LQ71UM5 84 aaKnown RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 ADCK2Q7Z695 626 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 PPP1R3BQ86XI6 285 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 PLD3Q8IV08 490 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 C10orf107Q8IVU9 208 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 OR4N4Q8N0Y3 316 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 L3MBTL4Q8NA19 623 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 CCDC63Q8NA47 563 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 MFSD9Q8NBP5 474 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 ZNF740Q8NDX6 193 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 NXPE2Q96DL1 559 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 TM4SF19Q96DZ7 209 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 THAP11Q96EK4 314 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 MOCOSQ96EN8 888 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 PTCD3Q96EY7 689 aaKnown RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 TEFMQ96QE5 360 aaKnown RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 CTRCQ99895 268 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 AIF1LQ9BQI0 150 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 NTMT1Q9BV86 223 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 ASPSCR1Q9BZE9 553 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 PITHD1Q9GZP4 211 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 GSTO2Q9H4Y5 243 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 NOL11Q9H8H0 719 aaKnown RBP12.29□□□□□ -0.44
TCOF1-210ENST00000506767 FANCEQ9HB96 536 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 KCNK9Q9NPC2 374 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 SERTAD3Q9UJW9 196 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 ANGPTL3Q9Y5C1 460 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 PCDHGA7Q9Y5G6 932 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 B3GALT1Q9Y5Z6 326 aa12.29□□□□□ -0.44
TCOF1-210ENST00000506767 MDC1Q14676 2089 aaKnown RBP12.28□□□□□ -0.44
TCOF1-210ENST00000506767 FITM1A5D6W6 292 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 H0YGG7 62 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 PPP6CO00743 305 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 BRINP1O60477 761 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 UGDHO60701 494 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 TRIM13O60858 407 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 H2AFYO75367 372 aaKnown RBP12.28□□□□□ -0.44
TCOF1-210ENST00000506767 SUPT7LO94864 414 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 TIAF1O95411 115 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 BPGMP07738 259 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 CXCR2P25025 360 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 RBMS1P29558 406 aaKnown RBP12.28□□□□□ -0.44
TCOF1-210ENST00000506767 BCL6P41182 706 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 SCTRP47872 440 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 NAGLUP54802 743 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 CDH13P55290 713 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 ITGA1P56199 1179 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 ARF3P61204 181 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-210ENST00000506767 IRF8Q02556 426 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 CLCQ05315 142 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 LAPTM5Q13571 262 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 XKR6Q5GH73 641 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 TCTE1Q5JU00 501 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 LIPJQ5W064 366 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 PWWP2BQ6NUJ5 590 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 VN1R4Q7Z5H5 301 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 OR52B6Q8NGF0 335 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 OR6Y1Q8NGX8 325 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 GATA6Q92908 595 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 SELENOSQ9BQE4 189 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 EFCAB11Q9BUY7 163 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 SPRTNQ9H040 489 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-210ENST00000506767 ACBD3Q9H3P7 528 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 ACSS2Q9NR19 701 aa12.28□□□□□ -0.44
TCOF1-210ENST00000506767 FOXJ2Q9P0K8 574 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms