RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 EGLN3Q9H6Z9 239 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 BARHL2Q9NY43 387 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 PRDM4Q9UKN5 801 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 POMT1Q9Y6A1 747 aa3.5□□□□□ -1.85
TOPBP1-204ENST00000505804 IL16Q14005 1332 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 A0A087WUV0 522 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 C15orf61A6NNL5 157 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 PRSS46E5RG02 174 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 PPIP5K2O43314 1243 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 FCGR3BO75015 233 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 PGLSO95336 258 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 RPN1P04843 607 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 RPL35AP18077 110 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 CYP2A7P20853 494 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 TLX1P31314 330 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 OPRL1P41146 370 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 SOX3P41225 446 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 CDX1P47902 265 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 IRX1P78414 480 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 DRP2Q13474 957 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 TRIM29Q14134 588 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 TMEM132DQ14C87 1099 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 E2F5Q15329 346 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 HLA-BQ31612 363 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 OR4C11Q6IEV9 310 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 TTC27Q6P3X3 843 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 FIP1L1Q6UN15 594 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 BTNL8Q6UX41 500 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 Q6ZRP5 223 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 DZIP1Q86YF9 867 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 SIX6OS1Q8N1H7 587 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 ZNF614Q8N883 585 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 GBP7Q8N8V2 638 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 OR6S1Q8NH40 331 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 MAPK15Q8TD08 544 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 BSCL2Q96G97 398 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 POM121L2Q96KW2 1035 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 BTBD9Q96Q07 612 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 CITED2Q99967 270 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 PI4K2AQ9BTU6 479 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 DGCR6LQ9BY27 220 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 NYXQ9GZU5 481 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 MINDY3Q9H8M7 445 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 RNF121Q9H920 327 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 RAVER2Q9HCJ3 691 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 RAB9BQ9NP90 201 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 MRGBPQ9NV56 204 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 PANK4Q9NVE7 773 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 ERAP1Q9NZ08 941 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 SPATA31D1Q6ZQQ2 1576 aa3.49□□□□□ -1.85
TOPBP1-204ENST00000505804 C5orf52A6NGY3 159 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 F8VVB4 439 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 F8VWA3 439 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 H0YAE9 185 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 FLRT2O43155 660 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 KRT33AO76009 404 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 NXPH2O95156 264 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 SIX3O95343 332 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 CGAP01215 116 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 ANKRD34CP0C6C1 535 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 RNF224P0DH78 156 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 TYMPP19971 482 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 ELAVL4P26378 380 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 SSTR1P30872 391 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 CLK1P49759 484 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 RBP5P82980 135 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 SGCGQ13326 291 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 MTF1Q14872 753 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 EFTUD2Q15029 972 aaKnown RBP eCLIP3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 FUT10Q6P4F1 479 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 ZNF497Q6ZNH5 498 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 SLC24A5Q71RS6 500 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 FCRLAQ7L513 359 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 CPEB2Q7Z5Q1 589 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 KRTAP7-1Q8IUC3 87 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 CROCCP3Q8IVE0 287 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 OR8H3Q8N146 312 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 GPC2Q8N158 579 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 FAM89BQ8N5H3 189 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 OR4C15Q8NGM1 316 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 GOT1L1Q8NHS2 421 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 RIT1Q92963 219 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 OPRPNQ99935 248 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 CDK19Q9BWU1 502 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 LMAN1LQ9HAT1 526 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 ZDHHC18Q9NUE0 388 aa3.48□□□□□ -1.85
TOPBP1-204ENST00000505804 MTMR11A4FU01 709 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 TMEM150CB9EJG8 249 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 ARHGEF9O43307 516 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 SELENOFO60613 162 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 ZNF883P0CG24 379 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 CD59P13987 128 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 TIA1P31483 386 aaKnown RBP eCLIP3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 MMP12P39900 470 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 OR3A2P47893 321 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 ROR1Q01973 937 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 BFSP1Q12934 665 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 CDH18Q13634 790 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 WLSQ5T9L3 541 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 TXNRD3NBQ6F5E7 133 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms