RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 NATD1Q8N6N6 113 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 FIG4Q92562 907 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 COQ8BQ96D53 544 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 CNBD2Q96M20 576 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 RNF145Q96MT1 663 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 PANX1Q96RD7 426 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 EPB41L1Q9H4G0 881 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 GEMIN8Q9NWZ8 242 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 DOCK8Q8NF50 2099 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 KRT87PA6NCN2 255 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 FPGTO14772 594 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 CCNDBP1O95273 360 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 PTX3P26022 381 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 MYBPC3Q14896 1274 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 OR4F3Q6IEY1 312 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 GCNT7Q6ZNI0 430 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 TP53I13Q8NBR0 393 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 TFAP2CQ92754 450 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 SLC29A1Q99808 456 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 DUSP26Q9BV47 211 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 TRPV5Q9NQA5 729 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 DCAF13Q9NV06 445 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 SAMD4AQ9UPU9 718 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 TMEM98Q9Y2Y6 226 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 SMIM31A0A1B0GVY4 71 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 RNASET2O00584 256 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 SOCS2O14508 198 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 PCDH7O60245 1069 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 KDM1AO60341 852 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 SEMA3DO95025 777 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 HPRP00739 348 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 DNTTP04053 509 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 LINGO3P0C6S8 592 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 CKMT2P17540 419 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 GPX2P18283 190 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 RPS13P62277 151 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 EPS8Q12929 822 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 BIRC2Q13490 618 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 THEMIS2Q5TEJ8 643 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 KRT80Q6KB66 452 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 FAM83HQ6ZRV2 1179 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 C17orf64Q86WR6 236 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 SVOPLQ8N434 492 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 SMPDL3AQ92484 453 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 FOXJ1Q92949 421 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 SDCCAG3Q96C92 435 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 EBPLQ9BY08 206 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 WASH6PQ9NQA3 447 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 DNAJB9Q9UBS3 223 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 ZNF282Q9UDV7 671 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 FZD4Q9ULV1 537 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 OAZ3Q9UMX2 235 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 PDE4DIPQ5VU43 2346 aa16.65■□□□□ 0.26
TRAPPC11-204ENST00000505676 A0A1W2PP55 124 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 SAC3D1A6NKF1 404 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 K7EQS6 105 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 SCN2BO60939 215 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 CREG1O75629 220 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 HOXC4P09017 264 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 RAE1P78406 368 aaKnown RBP16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 IRF4Q15306 451 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 CPZQ66K79 652 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 DNAJC14Q6Y2X3 702 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 EPHX4Q8IUS5 362 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 AIF1LQ9BQI0 150 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 OSBPL10Q9BXB5 764 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 MYNNQ9NPC7 610 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 CLEC1BQ9P126 229 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 LIMD1Q9UGP4 676 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 PCDHB11Q9Y5F2 797 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 ACOX3O15254 700 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 TPST1O60507 370 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 ABCB1P08183 1280 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 WNT3P56703 355 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 PLIN5Q00G26 463 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 PLA2G4EQ3MJ16 856 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 TMEM259Q4ZIN3 620 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 DOK6Q6PKX4 331 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 METTL4Q8N3J2 472 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 SNX19Q92543 992 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 SLC47A1Q96FL8 570 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 EGLN2Q96KS0 407 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 SEPHS2Q99611 448 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 INPP5KQ9BT40 448 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 RHBGQ9H310 441 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 IKZF5Q9H5V7 419 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 PIF1Q9H611 641 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 REEP4Q9H6H4 257 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 PRM3Q9NNZ6 103 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 SMPD3Q9NY59 655 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 UBAP1Q9NZ09 502 aa16.64■□□□□ 0.25
TRAPPC11-204ENST00000505676 GNG14A0A1W2PPG7 69 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 EIF4E1BA6NMX2 242 aaKnown RBP16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 ANHXE9PGG2 379 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 H0YAE9 185 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 CLIC1O00299 241 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 LRATO95237 230 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 SH3BGRP55822 239 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 CATSPEREQ5SY80 951 aa16.63■□□□□ 0.25
TRAPPC11-204ENST00000505676 TMIGD1Q6UXZ0 262 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms