RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CHMP2BQ9UQN3 213 aa18.48■□□□□ 0.55
UBE2D3-215ENST00000503418 IDSB3KWA1 339 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 FOXS1O43638 330 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 HEXBP07686 556 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 CXCR2P25025 360 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 IVDP26440 423 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 SLC26A3P40879 764 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 ELK3P41970 407 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 RELAQ04206 551 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 Q0VFX4 171 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 SP140Q13342 867 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 PDAP1Q13442 181 aaKnown RBP18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 MORF4L2Q15014 288 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 NR6A1Q15406 480 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 NDUFA9Q16795 377 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 SYT16Q17RD7 645 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 KIAA0408Q6ZU52 694 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 CNTN4Q8IWV2 1026 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 PDIK1LQ8N165 341 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 GPATCH11Q8N954 259 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 PRR7Q8TB68 274 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 PPP4R1Q8TF05 950 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 PARVBQ9HBI1 364 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 MKKSQ9NPJ1 570 aaPredicted RBP18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 TMEM184CQ9NVA4 438 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 PCDHGA10Q9Y5H3 936 aa18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 COPG1Q9Y678 874 aaKnown RBP18.47■□□□□ 0.55
UBE2D3-215ENST00000503418 NSG1A0A0A6YYJ2 146 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 PABPN1LA6NDY0 278 aaKnown RBP18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 SEMA7AO75326 666 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 GP1BBP13224 206 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 HRH2P25021 359 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 GNG11P61952 73 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 RPS15AP62244 130 aaKnown RBP18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 MAT1AQ00266 395 aaKnown RBP18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 DR1Q01658 176 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 EEF1A2Q05639 463 aaKnown RBP18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 NAE1Q13564 534 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 ATG9BQ674R7 924 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 AGTRAPQ6RW13 159 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 LINC00696Q6ZRV3 163 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 SYDE1Q6ZW31 735 aaPredicted RBP18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 C17orf64Q86WR6 236 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 ARHGEF39Q8N4T4 335 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 DNAJB14Q8TBM8 379 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 RUNDC3BQ96NL0 473 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 PSMG3-AS1Q96PY0 264 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 TRIM51Q9BSJ1 452 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 PCBD2Q9H0N5 130 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 NOVA2Q9UNW9 492 aaKnown RBP18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 SH2B3Q9UQQ2 575 aa18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 MRPS2Q9Y399 296 aaKnown RBP18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 USP9XQ93008 2570 aaPredicted RBP18.46■□□□□ 0.55
UBE2D3-215ENST00000503418 SCN3AQ9NY46 2000 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 CNTRLQ7Z7A1 2325 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 SLC16A5O15375 505 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 HIST1H2AGP0C0S8 130 aaPredicted RBP18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 COX6A1P12074 109 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 HIST1H2ADP20671 130 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 AVPR1BP47901 424 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 PGGT1BP53609 377 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 IL2P60568 153 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 SNRPNP63162 240 aaKnown RBP18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 FAM53BQ14153 422 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 PHKG1Q16816 387 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 TEDDM1Q5T9Z0 273 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 HECTD2Q5U5R9 776 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 IGFL2Q6UWQ7 119 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 KBTBD2Q8IY47 623 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 OR9A4Q8NGU2 314 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 HIST1H2AHQ96KK5 128 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 HIST1H2AJQ99878 128 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 MACROD1Q9BQ69 325 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 H2AFJQ9BTM1 129 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 PLAC1Q9HBJ0 212 aa18.45■□□□□ 0.54
UBE2D3-215ENST00000503418 FEZF1A0PJY2 475 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 TTI1O43156 1089 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 UQCRHP07919 91 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 CDH1P12830 882 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 CCND1P24385 295 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 ITGA8P53708 1063 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 CSNK1G2P78368 415 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 MFSD4BQ5TF39 518 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 HIBCHQ6NVY1 386 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 TRMT10BQ6PF06 316 aaKnown RBP18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 ISLR2Q6UXK2 745 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 NDUFAF7Q7L592 441 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 PRSS41Q7RTY9 318 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 VN1R4Q7Z5H5 301 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 GALNT7Q86SF2 657 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 CREG2Q8IUH2 290 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 ZC3H7AQ8IWR0 971 aaKnown RBP18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 SSC4DQ8WTU2 575 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 NAPGQ99747 312 aaPredicted RBP18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 WDR83Q9BRX9 315 aaKnown RBP18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 TRIM31Q9BZY9 425 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 TGIF2Q9GZN2 237 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 ARL15Q9NXU5 204 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 MKL2Q9ULH7 1088 aa18.44■□□□□ 0.54
UBE2D3-215ENST00000503418 NTNG1Q9Y2I2 539 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms