RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CASP6P55212 293 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 EIF3BP55884 814 aaKnown RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 RPS15AP62244 130 aaKnown RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 MPP1Q00013 466 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 EXT1Q16394 746 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 MEP1AQ16819 746 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ZXDCQ2QGD7 858 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 KLHL38Q2WGJ6 581 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CCSMST1Q4G0I0 132 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 MEI1Q5TIA1 1274 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ABHD17BQ5VST6 288 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 HIBCHQ6NVY1 386 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 GFRALQ6UXV0 394 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 SHISA6Q6ZSJ9 500 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 MICALCLQ6ZW33 695 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CPEB2Q7Z5Q1 589 aaKnown RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 STRA8Q7Z7C7 330 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 MRGPRGQ86SM5 289 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 LDB1Q86U70 411 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 TAX1BP1Q86VP1 789 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ZC3H7AQ8IWR0 971 aaKnown RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 EID3Q8N140 333 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 C2orf73Q8N5S3 287 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 HORMAD2Q8N7B1 307 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 GPATCH11Q8N954 259 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ACRBPQ8NEB7 543 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 M1APQ8TC57 530 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ZNF480Q8WV37 535 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 METTL21AQ8WXB1 218 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ASB11Q8WXH4 323 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ATG4AQ8WYN0 398 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 C8orf44Q96CB5 159 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 MFSD3Q96ES6 412 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 MMABQ96EY8 250 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CCDC120Q96HB5 630 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 GPR137Q96N19 417 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 OR1F2PQ96R84 312 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CYTH2Q99418 400 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 SPOCK3Q9BQ16 436 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 TREX2Q9BQ50 279 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 MMP25Q9NPA2 562 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 STMN3Q9NZ72 180 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 PTGFRNQ9P2B2 879 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 SEC14L3Q9UDX4 400 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 PACSIN2Q9UNF0 486 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CAPN6Q9Y6Q1 641 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 PDZD2O15018 2839 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CSMD2Q7Z408 3487 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CACNA1CQ13936 2221 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 A0A0U1RQJ8 604 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SYNDIG1LA6NDD5 238 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 E5RI56 91 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 CCL21O00585 134 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SLC16A5O15375 505 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 NRP2O60462 931 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SLC19A2O60779 497 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 NIPSNAP2O75323 286 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 UNC5CO95185 931 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 VAPBO95292 243 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 FTCDO95954 541 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 EIF2S1P05198 315 aaKnown RBP5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 ITGAMP11215 1152 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 CHRM3P20309 590 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 CDC25BP30305 580 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SSTR2P30874 369 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 FMO4P31512 558 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 BCL6P41182 706 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 MAGEA3P43357 314 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 BDKRB1P46663 353 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SMSP52788 366 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SKP1P63208 163 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SP140Q13342 867 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 FASTKQ14296 549 aaKnown RBP5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 KCNJ11Q14654 390 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 HKDC1Q2TB90 917 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 BBS9Q3SYG4 887 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 ZNF766Q5HY98 468 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 ACER2Q5QJU3 275 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 TMEM214Q6NUQ4 689 aaKnown RBP5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 NEPROQ6NW34 567 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SPNS3Q6ZMD2 512 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 CYHR1Q6ZMK1 362 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 CENPUQ71F23 418 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 VN1R4Q7Z5H5 301 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 GALNT7Q86SF2 657 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 REXO1L1PQ8IX06 675 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 DTWD1Q8N5C7 304 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 METTL27Q8N6F8 245 aaPredicted RBP5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SIRT6Q8N6T7 355 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 POGLUT1Q8NBL1 392 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 TMEM178AQ8NBL3 297 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 CAMKVQ8NCB2 501 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 MDS2Q8NDY4 140 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 MCUQ8NE86 351 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 OR4K1Q8NGD4 311 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 OR51Q1Q8NH59 317 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 CALML6Q8TD86 181 aa5.77□□□□□ -1.49
LSM3P4-201ENST00000502948 SKA2Q8WVK7 121 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms