RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 ODF4Q2M2E3 257 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 CTU2Q2VPK5 515 aaKnown RBP5.71□□□□□ -1.5
NEDD4-203ENST00000502612 ACCSLQ4AC99 568 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 ZRANB3Q5FWF4 1079 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 CYP4A22Q5TCH4 519 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 FAM91A1Q658Y4 838 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 RBMS3Q6XE24 437 aaKnown RBP5.71□□□□□ -1.5
NEDD4-203ENST00000502612 TMEM182Q6ZP80 229 aaPredicted RBP5.71□□□□□ -1.5
NEDD4-203ENST00000502612 C11orf57Q6ZUT1 292 aaPredicted RBP5.71□□□□□ -1.5
NEDD4-203ENST00000502612 MARK2Q7KZI7 788 aaKnown RBP5.71□□□□□ -1.5
NEDD4-203ENST00000502612 ISCA2Q86U28 154 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 HSCBQ8IWL3 235 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 STPG4Q8N801 248 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 OR10Q1Q8NGQ4 319 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 LRRC8CQ8TDW0 803 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 HEXDCQ8WVB3 486 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 PROX1Q92786 737 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 CORO2AQ92828 525 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 EGFL8Q99944 293 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 DESI2Q9BSY9 194 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 URM1Q9BTM9 101 aaKnown RBP5.71□□□□□ -1.5
NEDD4-203ENST00000502612 ZNF334Q9HCZ1 680 aaPredicted RBP5.71□□□□□ -1.5
NEDD4-203ENST00000502612 HYPKQ9NX55 129 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 DLG5Q8TDM6 1919 aa5.71□□□□□ -1.5
NEDD4-203ENST00000502612 IBTKQ9P2D0 1353 aaPredicted RBP5.7□□□□□ -1.5
NEDD4-203ENST00000502612 VIRMAQ69YN4 1812 aaKnown RBP5.7□□□□□ -1.5
NEDD4-203ENST00000502612 HTR3EA5X5Y0 456 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 ANKRD61A6NGH8 418 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 CASTOR2A6NHX0 329 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 ZNF197O14709 1029 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 ATP6AP2O75787 350 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 REC8O95072 547 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 TGDSO95455 350 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 NGFP01138 241 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 PAX1P15863 534 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 PTMSP20962 102 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 MTCP1P56278 107 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 CLDN15P56746 228 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 GCNT1Q02742 428 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 SQLEQ14534 574 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 CCNYL2Q5T2Q4 361 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 ENPP7Q6UWV6 458 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 TRPT1Q86TN4 253 aaKnown RBP5.7□□□□□ -1.5
NEDD4-203ENST00000502612 NUDT13Q86X67 352 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 OR4K1Q8NGD4 311 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 TM9SF4Q92544 642 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 FAM162AQ96A26 154 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 NSL1Q96IY1 281 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 PRRG4Q9BZD6 226 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 LRRCC1Q9C099 1032 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 ALDH8A1Q9H2A2 487 aaPredicted RBP5.7□□□□□ -1.5
NEDD4-203ENST00000502612 FAM118AQ9NWS6 357 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 MIS18AQ9NYP9 233 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 NOL7Q9UMY1 257 aaKnown RBP5.7□□□□□ -1.5
NEDD4-203ENST00000502612 STUB1Q9UNE7 303 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 SNX7Q9UNH6 387 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 RGS12O14924 1447 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 TNS3Q68CZ2 1445 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 LTN1O94822 1766 aa5.7□□□□□ -1.5
NEDD4-203ENST00000502612 CPDO75976 1380 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 MARF1Q9Y4F3 1742 aaKnown RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 ATP10DQ9P241 1426 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 CCL24O00175 119 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 PRKRAO75569 313 aaKnown RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 DDHD2O94830 711 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 IRF2P14316 349 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 EFNA1P20827 205 aaPredicted RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 MUTP22033 750 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 CDH3P22223 829 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 PTK6Q13882 451 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 SLC25A53Q5H9E4 307 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 MOXD1Q6UVY6 613 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 MEX3BQ6ZN04 569 aaKnown RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 C18orf65Q6ZTR6 163 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 SPATA21Q7Z572 469 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 ERC1Q8IUD2 1116 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 LGI2Q8N0V4 545 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 TTC5Q8N0Z6 440 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 SIX6OS1Q8N1H7 587 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 GRAPLQ8TC17 118 aaPredicted RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 PHLDA1Q8WV24 401 aaPredicted RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 ATP6V1E2Q96A05 226 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 TMEM143Q96AN5 459 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 ZNF524Q96C55 264 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 GPATCH1Q9BRR8 931 aaKnown RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 RAB9BQ9NP90 201 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 SIX2Q9NPC8 291 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 ECHDC1Q9NTX5 307 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 FAM208AQ9UK61 1670 aaKnown RBP5.69□□□□□ -1.5
NEDD4-203ENST00000502612 CAMTA1Q9Y6Y1 1673 aa5.69□□□□□ -1.5
NEDD4-203ENST00000502612 MED1Q15648 1581 aaPredicted RBP5.68□□□□□ -1.5
NEDD4-203ENST00000502612 A0A1W2PN81 502 aa5.68□□□□□ -1.5
NEDD4-203ENST00000502612 FAM172BPA6NC97 362 aa5.68□□□□□ -1.5
NEDD4-203ENST00000502612 H0Y626 953 aa5.68□□□□□ -1.5
NEDD4-203ENST00000502612 ATP6V0E1O15342 81 aa5.68□□□□□ -1.5
NEDD4-203ENST00000502612 ZNF432O94892 652 aa5.68□□□□□ -1.5
NEDD4-203ENST00000502612 SLU7O95391 586 aaKnown RBP5.68□□□□□ -1.5
NEDD4-203ENST00000502612 UMODP07911 640 aa5.68□□□□□ -1.5
NEDD4-203ENST00000502612 SUPT20HL2P0C7V6 817 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms