RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 GFERP55789 205 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 PHEXP78562 749 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 DDX39BQ13838 428 aaKnown RBP13.53□□□□□ -0.24
UBE3C-207ENST00000494532 RBBP5Q15291 538 aaKnown RBP13.53□□□□□ -0.24
UBE3C-207ENST00000494532 GKAP1Q5VSY0 366 aaPredicted RBP13.53□□□□□ -0.24
UBE3C-207ENST00000494532 EPGNQ6UW88 154 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 TMIGD1Q6UXZ0 262 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 FAM92BQ6ZTR7 304 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 ACAD11Q709F0 780 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 PIGWQ7Z7B1 504 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 PAQR7Q86WK9 346 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 NAXDQ8IW45 347 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 LAS2Q8IYD9 372 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 ZNF740Q8NDX6 193 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 OR7G3Q8NG95 312 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 C10orf82Q8WW14 230 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 USP7Q93009 1102 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 MTFMTQ96DP5 389 aaKnown RBP13.53□□□□□ -0.24
UBE3C-207ENST00000494532 ZDHHC12Q96GR4 267 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 CD180Q99467 661 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 CCT7Q99832 543 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 KLHL25Q9H0H3 589 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 SEMA6CQ9H3T2 930 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 TUBB1Q9H4B7 451 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 SYNDIG1Q9H7V2 258 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 MEAF6Q9HAF1 191 aa13.53□□□□□ -0.24
UBE3C-207ENST00000494532 FARSBQ9NSD9 589 aaKnown RBP13.53□□□□□ -0.24
UBE3C-207ENST00000494532 APOBEC2Q9Y235 224 aaKnown RBP13.53□□□□□ -0.24
UBE3C-207ENST00000494532 WDFY4Q6ZS81 3184 aa13.52□□□□□ -0.24
UBE3C-207ENST00000494532 OR2A25A4D2G3 310 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 TLCD2A6NGC4 264 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 PROB1E7EW31 1015 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 SLC28A1O00337 649 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 SDHDO14521 159 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 HAT1O14929 419 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 OR1F1O43749 312 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 SH3BP5O60239 455 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 NRP2O60462 931 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 CKMT2P17540 419 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 TGM1P22735 817 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 CSF2RBP32927 897 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 IDH3AP50213 366 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 CCL7P80098 99 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 ZNF33BQ06732 778 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 ABRAXAS2Q15018 415 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 IMPG1Q17R60 797 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 SLC9B1Q4ZJI4 515 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 C10orf62Q5T681 223 aaPredicted RBP13.52□□□□□ -0.25
UBE3C-207ENST00000494532 FCRL6Q6DN72 434 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 RNF165Q6ZSG1 346 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 USP53Q70EK8 1073 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 PLXDC1Q8IUK5 500 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 PLD3Q8IV08 490 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBE3C-207ENST00000494532 WDR20Q8TBZ3 569 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 ZUFSPQ96AP4 578 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 HBEGFQ99075 208 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 MAP3K3Q99759 626 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 EBF4Q9BQW3 602 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 KCNK13Q9HB14 408 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 C1GALT1Q9NS00 363 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 RIC8BQ9NVN3 520 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 KLHL3Q9UH77 587 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 KLK4Q9Y5K2 254 aa13.52□□□□□ -0.25
UBE3C-207ENST00000494532 MN1Q10571 1320 aaPredicted RBP13.51□□□□□ -0.25
UBE3C-207ENST00000494532 GOLGA8QA0A0J9YX86 632 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 GOLGA8OA6NCC3 632 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 ANKDD1BA6NHY2 528 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 GOLGA8NF8WBI6 632 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 VPS4BO75351 444 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 RASSF9O75901 435 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 RPLP0P05388 317 aaKnown RBP13.51□□□□□ -0.25
UBE3C-207ENST00000494532 EZRP15311 586 aaKnown RBP13.51□□□□□ -0.25
UBE3C-207ENST00000494532 ST6GAL1P15907 406 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 EPHA3P29320 983 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 SERPINB1P30740 379 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 BCL6P41182 706 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 SCTRP47872 440 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 NEK2P51955 445 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 RPS15AP62244 130 aaKnown RBP13.51□□□□□ -0.25
UBE3C-207ENST00000494532 CFHR1Q03591 330 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 CYP4F3Q08477 520 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 NXNQ6DKJ4 435 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 ADNP2Q6IQ32 1131 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 WDR74Q6RFH5 385 aaPredicted RBP13.51□□□□□ -0.25
UBE3C-207ENST00000494532 CACNA2D3Q8IZS8 1091 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 C19orf47Q8N9M1 422 aaKnown RBP13.51□□□□□ -0.25
UBE3C-207ENST00000494532 CCDC197Q8NCU1 140 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 TTLQ8NG68 377 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 HUS1BQ8NHY5 278 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
UBE3C-207ENST00000494532 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 RILPQ96NA2 401 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 TRAPPC9Q96Q05 1148 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 MTERF1Q99551 399 aaKnown RBP13.51□□□□□ -0.25
UBE3C-207ENST00000494532 CCDC28BQ9BUN5 200 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 LRRN3Q9H3W5 708 aa13.51□□□□□ -0.25
UBE3C-207ENST00000494532 WDR55Q9H6Y2 383 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms