RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 AKIRIN1Q9H9L7 192 aaPredicted RBP7.82□□□□□ -1.16
RIF1-211ENST00000494333 LHX9Q9NQ69 397 aa7.82□□□□□ -1.16
RIF1-211ENST00000494333 CHRAC1Q9NRG0 131 aa7.82□□□□□ -1.16
RIF1-211ENST00000494333 KCND1Q9NSA2 647 aa7.82□□□□□ -1.16
RIF1-211ENST00000494333 SOHLH2Q9NX45 425 aa7.82□□□□□ -1.16
RIF1-211ENST00000494333 GALNT8Q9NY28 637 aa7.82□□□□□ -1.16
RIF1-211ENST00000494333 ANAPC5Q9UJX4 755 aa7.82□□□□□ -1.16
RIF1-211ENST00000494333 RIMKLBQ9ULI2 386 aa7.82□□□□□ -1.16
RIF1-211ENST00000494333 ASB1Q9Y576 335 aa7.82□□□□□ -1.16
RIF1-211ENST00000494333 MRPS18BQ9Y676 258 aaKnown RBP7.82□□□□□ -1.16
RIF1-211ENST00000494333 ZFC3H1O60293 1989 aaKnown RBP7.82□□□□□ -1.16
RIF1-211ENST00000494333 SDK2Q58EX2 2172 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 MGAQ8IWI9 3026 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 SLC5A10A0PJK1 596 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 GSAPA4D1B5 854 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 GOLGA6L3A6NEY3 463 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 MATN2O00339 956 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 CYP7B1O75881 506 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 FTH1P02794 183 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 OAS2P29728 719 aaKnown RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 PRDX3P30048 256 aaKnown RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 PPARGP37231 505 aaPredicted RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 TERF1P54274 439 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 SLURP1P55000 103 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 CSE1LP55060 971 aaKnown RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 TUBB4BP68371 445 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 CRADDP78560 199 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 MC1RQ01726 317 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 PLOD1Q02809 727 aaPredicted RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 ACVR1Q04771 509 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 CDC20Q12834 499 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 TUBB2AQ13885 445 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 BOP1Q14137 746 aaKnown RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 ERV3-1Q14264 604 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 SEMA3AQ14563 771 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 KCTD19Q17RG1 926 aaPredicted RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 DEFB109BQ30KR1 87 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 FASTKD1Q53R41 847 aaKnown RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 ATP1A1-AS1Q5TC04 95 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 FAM199XQ6PEV8 388 aaPredicted RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 DRICH1Q6PGQ1 229 aaPredicted RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 AFTPHQ6ULP2 937 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 C4orf22Q6V702 233 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 PACS1Q6VY07 963 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 ZNF534Q76KX8 674 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 STRA8Q7Z7C7 330 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 LDB1Q86U70 411 aaPredicted RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 TMEM126BQ8IUX1 230 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 PPHLN1Q8NEY8 458 aaKnown RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 PEX13Q92968 403 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 FOXRED1Q96CU9 486 aaPredicted RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 ZNF501Q96CX3 271 aaPredicted RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 HGH1Q9BTY7 390 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 TUBB2BQ9BVA1 445 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 SLC25A18Q9H1K4 315 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 HOMER3Q9NSC5 361 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 STARD5Q9NSY2 213 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 GEMIN8Q9NWZ8 242 aaKnown RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 KCND3Q9UK17 655 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 POMT2Q9UKY4 750 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 ASF1AQ9Y294 204 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 PPP2R2CQ9Y2T4 447 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 TDRKHQ9Y2W6 561 aaKnown RBP7.81□□□□□ -1.16
RIF1-211ENST00000494333 TCAF1Q9Y4C2 921 aa7.81□□□□□ -1.16
RIF1-211ENST00000494333 FASNP49327 2511 aaKnown RBP7.8□□□□□ -1.16
RIF1-211ENST00000494333 PIPSLA2A3N6 862 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 IQCF5A8MTL0 148 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 C2orf74A8MZ97 194 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 F8W8V4 182 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 J3QKU1 62 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 AP3B1O00203 1094 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 BTN3A1O00481 513 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 SLC28A2O43868 658 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 SCRG1O75711 98 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 PVRP15151 417 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 ST6GAL1P15907 406 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 ACADLP28330 430 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 CCR7P32248 378 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 NPY2RP49146 381 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 POLE2P56282 527 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 IL2P60568 153 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 NFKB2Q00653 900 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 HSPA14Q0VDF9 509 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 DNASE1L3Q13609 305 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 TRIP13Q15645 432 aaPredicted RBP7.8□□□□□ -1.16
RIF1-211ENST00000494333 SYTL3Q4VX76 610 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 PRAMEF17Q5VTA0 474 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 TRMT10BQ6PF06 316 aaKnown RBP7.8□□□□□ -1.16
RIF1-211ENST00000494333 HOOK3Q86VS8 718 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 TBC1D21Q8IYX1 336 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 ADGRF3Q8IZF5 1079 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 PRELID2Q8N945 189 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 SLC38A9Q8NBW4 561 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 OR5AR1Q8NGP9 310 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 OR8K5Q8NH50 307 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 APOBEC4Q8WW27 367 aaKnown RBP7.8□□□□□ -1.16
RIF1-211ENST00000494333 SPATA25Q9BR10 227 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 IL22Q9GZX6 179 aa7.8□□□□□ -1.16
RIF1-211ENST00000494333 ADNPQ9H2P0 1102 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms