RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 UROSP10746 265 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 BCL6P41182 706 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 HNF4AP41235 474 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 COL9A2Q14055 689 aaPredicted RBP18.59■□□□□ 0.57
USP39-218ENST00000493829 HIST2H2ACQ16777 129 aaPredicted RBP18.59■□□□□ 0.57
USP39-218ENST00000493829 VWA5B1Q5TIE3 1220 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 HIST2H2AA3Q6FI13 130 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 MED27Q6P2C8 311 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 WDR74Q6RFH5 385 aaPredicted RBP18.59■□□□□ 0.57
USP39-218ENST00000493829 PIP4P1Q86T03 277 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.59■□□□□ 0.57
USP39-218ENST00000493829 CLYBLQ8N0X4 340 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 KRT78Q8N1N4 520 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 AFAP1L2Q8N4X5 818 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 SLC29A3Q9BZD2 475 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 NUF2Q9BZD4 464 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 RAB33BQ9H082 229 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 SYNPO2LQ9H987 977 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 TMEM184CQ9NVA4 438 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 EPHA6Q9UF33 1036 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 HAO1Q9UJM8 370 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.59■□□□□ 0.57
USP39-218ENST00000493829 DNAJC15Q9Y5T4 150 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 ZNF292O60281 2723 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 HGSO14964 777 aaPredicted RBP18.58■□□□□ 0.57
USP39-218ENST00000493829 PIP5K1BO14986 540 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 CTSVO60911 334 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 SH3BGRLO75368 114 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 GRK3P35626 688 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 CASP2P42575 452 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 IFT88Q13099 833 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 SPIDRQ14159 915 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 TMIGD1Q6UXZ0 262 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 ZNF574Q6ZN55 896 aaPredicted RBP18.58■□□□□ 0.57
USP39-218ENST00000493829 MAVSQ7Z434 540 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 OR4K1Q8NGD4 311 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 RFWD2Q8NHY2 731 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 CCT6BQ92526 530 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 MTERF1Q99551 399 aaKnown RBP18.58■□□□□ 0.57
USP39-218ENST00000493829 C1GALT1Q9NS00 363 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 DCTN4Q9UJW0 460 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 ZNF490Q9ULM2 529 aaPredicted RBP18.58■□□□□ 0.57
USP39-218ENST00000493829 SNX6Q9UNH7 406 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 USH1CQ9Y6N9 552 aa18.58■□□□□ 0.57
USP39-218ENST00000493829 A0A0J9YVX5 310 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 OR2A25A4D2G3 310 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 D6RAR5 112 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 LCMT2O60294 686 aaKnown RBP18.57■□□□□ 0.56
USP39-218ENST00000493829 CHEK2O96017 543 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 PDYNP01213 254 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 C9P02748 559 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 SERPIND1P05546 499 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 GP1BAP07359 652 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 LINC00032P0C843 101 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 DRD4P21917 467 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 MLLT3P42568 568 aaPredicted RBP18.57■□□□□ 0.56
USP39-218ENST00000493829 CLDN6P56747 220 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 PCDH1Q08174 1060 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 LAPTM5Q13571 262 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 E2F2Q14209 437 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 KCNAB1Q14722 419 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 ABRAXAS2Q15018 415 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 FRG2Q64ET8 278 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 TMEM71Q6P5X7 295 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 CPLX4Q7Z7G2 160 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 WDR75Q8IWA0 830 aaKnown RBP18.57■□□□□ 0.56
USP39-218ENST00000493829 ANKRD53Q8N9V6 530 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 RCBTB1Q8NDN9 531 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 OR7G3Q8NG95 312 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 SELENOMQ8WWX9 145 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 MAGEB10Q96LZ2 347 aaPredicted RBP18.57■□□□□ 0.56
USP39-218ENST00000493829 FRG2BQ96QU4 278 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 CD180Q99467 661 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 NSRP1Q9H0G5 558 aaKnown RBP18.57■□□□□ 0.56
USP39-218ENST00000493829 TUBB1Q9H4B7 451 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 FAM60AQ9NP50 221 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 SPEGQ15772 3267 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 HEATR5BQ9P2D3 2071 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 RFPL3O75679 317 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 FKBP9O95302 570 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 KRT6AP02538 564 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 KRT6BP04259 564 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 FGF4P08620 206 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 TROVE2P10155 538 aaKnown RBP eCLIP18.57■□□□□ 0.56
USP39-218ENST00000493829 HRH2P25021 359 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 CXCR2P25025 360 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 KRT6CP48668 564 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 ARL4DP49703 201 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 BTKQ06187 659 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 TRIP6Q15654 476 aaKnown RBP18.57■□□□□ 0.56
USP39-218ENST00000493829 UGT3A2Q3SY77 523 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 PHF19Q5T6S3 580 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 CCDC74BQ96LY2 380 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 MACROD1Q9BQ69 325 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 EPN3Q9H201 632 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 PCDHGA11Q9Y5H2 935 aa18.57■□□□□ 0.56
USP39-218ENST00000493829 IGHV5-10-1A0A0J9YXX1 117 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 TRBC2A0A5B9 178 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 H0YIV9 168 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 HCRTR1O43613 425 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms