RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.3□□□□□ -1.88
SMC4-223ENST00000493695 EXT2Q93063 718 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 MOB3AQ96BX8 217 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 RAD9AQ99638 391 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 Q9H8V8 135 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 ZCCHC17Q9NP64 241 aaKnown RBP3.3□□□□□ -1.88
SMC4-223ENST00000493695 STK26Q9P289 416 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 PPP2R2CQ9Y2T4 447 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 CSNK1G3Q9Y6M4 447 aa3.3□□□□□ -1.88
SMC4-223ENST00000493695 MPTX1A8MV57 137 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 CLDN4O14493 209 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 MEIS2O14770 477 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 EPHB6O15197 1021 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 SIX3O95343 332 aaPredicted RBP3.29□□□□□ -1.88
SMC4-223ENST00000493695 IGHEP01854 428 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 APOA4P06727 396 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 SAGP10523 405 aaPredicted RBP3.29□□□□□ -1.88
SMC4-223ENST00000493695 HSPA8P11142 646 aaKnown RBP3.29□□□□□ -1.88
SMC4-223ENST00000493695 GP1BBP13224 206 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 EPCAMP16422 314 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 IFNAR1P17181 557 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 ERCC2P18074 760 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 TSFMP43897 325 aaKnown RBP3.29□□□□□ -1.88
SMC4-223ENST00000493695 MAPK12P53778 367 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 LY6DQ14210 128 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 KIF6Q6ZMV9 814 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 Q6ZVH6 145 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 IL17RELQ6ZVW7 336 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 NUP54Q7Z3B4 507 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 TMEM139Q8IV31 216 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 EID3Q8N140 333 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 ABHD12Q8N2K0 398 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 METTL4Q8N3J2 472 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 CAMKVQ8NCB2 501 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 SPSB1Q96BD6 273 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 CNOT6LQ96LI5 555 aaKnown RBP3.29□□□□□ -1.88
SMC4-223ENST00000493695 ZMAT2Q96NC0 199 aaKnown RBP3.29□□□□□ -1.88
SMC4-223ENST00000493695 ZNF577Q9BSK1 485 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 MED20Q9H944 212 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 GKN1Q9NS71 199 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 TNNQ9UQP3 1299 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 ZNF510Q9Y2H8 683 aa3.29□□□□□ -1.88
SMC4-223ENST00000493695 PI4K2BG5E9Z4 385 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 GPRIN2O60269 458 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 IGHV4-31P0DP07 118 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 KLK2P20151 261 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 EEF1B2P24534 225 aaKnown RBP3.28□□□□□ -1.88
SMC4-223ENST00000493695 NAGLUP54802 743 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 DLK1P80370 383 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 ZNF415Q09FC8 603 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 FCHO2Q0JRZ9 810 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 CAMK2DQ13557 499 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 CUL3Q13618 768 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 PSMD6Q15008 389 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 TNIP1Q15025 636 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 PHLDA2Q53GA4 152 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 PDLIM3Q53GG5 364 aaPredicted RBP3.28□□□□□ -1.88
SMC4-223ENST00000493695 FAM166AQ6J272 317 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 TMEM207Q6UWW9 146 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 ZBTB49Q6ZSB9 765 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 MARCH9Q86YJ5 346 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 THAP8Q8NA92 274 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 OR52N5Q8NH56 324 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 KIF18AQ8NI77 898 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 LRRC15Q8TF66 581 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 PHLDA1Q8WV24 401 aaPredicted RBP3.28□□□□□ -1.88
SMC4-223ENST00000493695 SYN2Q92777 582 aaPredicted RBP3.28□□□□□ -1.88
SMC4-223ENST00000493695 FZD8Q9H461 694 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 GNB4Q9HAV0 340 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 CDH20Q9HBT6 801 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 B3GAT2Q9NPZ5 323 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 FGF21Q9NSA1 209 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 P4HTMQ9NXG6 502 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 NDE1Q9NXR1 346 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 DAPK2Q9UIK4 370 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 RNF150Q9ULK6 438 aa3.28□□□□□ -1.88
SMC4-223ENST00000493695 A0A1W2PR80 420 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 CASTOR2A6NHX0 329 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 ANXA2P2A6NMY6 339 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 O00370 1275 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 POP4O95707 220 aaKnown RBP3.27□□□□□ -1.89
SMC4-223ENST00000493695 HPP00738 406 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 SCG2P13521 617 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 FOLR2P14207 255 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 PSMA3P25788 255 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 MAZP56270 477 aaKnown RBP3.27□□□□□ -1.89
SMC4-223ENST00000493695 CD300CQ08708 224 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 NPTX1Q15818 432 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 EIPR1Q53HC9 387 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 SLC25A53Q5H9E4 307 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 CES4AQ5XG92 561 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 C11orf63Q6NUN7 778 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 TRAT1Q6PIZ9 186 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 ZNF841Q6ZN19 808 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 ARHGAP22Q7Z5H3 698 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 ABI3BPQ7Z7G0 1075 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 GLRX5Q86SX6 157 aa3.27□□□□□ -1.89
SMC4-223ENST00000493695 TLK2Q86UE8 772 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms