RNA–Protein interactions for RNA: ENST00000492464.1

MMP11-212, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-212ENST00000492464 LAPTM5Q13571 262 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 RBBP7Q16576 425 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 PAGE2BQ5JRK9 111 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 TCTE1Q5JU00 501 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 CFAP157Q5JU67 520 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 LIPMQ5VYY2 423 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 IGF2-ASQ6U949 168 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 TMEM126BQ8IUX1 230 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 KRT78Q8N1N4 520 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 CCNYL1Q8N7R7 359 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 OR4K1Q8NGD4 311 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 ZNF483Q8TF39 744 aaPredicted RBP13.53□□□□□ -0.24
MMP11-212ENST00000492464 USP7Q93009 1102 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 ATP6V1E2Q96A05 226 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 ARL8AQ96BM9 186 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 ZNF501Q96CX3 271 aaPredicted RBP13.53□□□□□ -0.24
MMP11-212ENST00000492464 THAP11Q96EK4 314 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 L3HYPDHQ96EM0 354 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 PTCD3Q96EY7 689 aaKnown RBP13.53□□□□□ -0.24
MMP11-212ENST00000492464 PRR11Q96HE9 360 aaPredicted RBP13.53□□□□□ -0.24
MMP11-212ENST00000492464 TMEM237Q96Q45 408 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 EFCAB11Q9BUY7 163 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 C1QTNF3Q9BXJ4 246 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 B3GNT4Q9C0J1 378 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 APMAPQ9HDC9 416 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 OXSMQ9NWU1 459 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 PILRAQ9UKJ1 303 aa13.53□□□□□ -0.24
MMP11-212ENST00000492464 FEZF1A0PJY2 475 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 HMGB1P1B2RPK0 211 aaPredicted RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 OR1F1O43749 312 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 BRINP1O60477 761 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 SRPX2O60687 465 aaPredicted RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 DXOO77932 396 aaKnown RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 SUPT7LO94864 414 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 EPORP19235 508 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 VARSP26640 1264 aaKnown RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 GABRA4P48169 554 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 DNAJB13P59910 316 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 NAA20P61599 178 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 SLBPQ14493 270 aaKnown RBP eCLIP13.52□□□□□ -0.25
MMP11-212ENST00000492464 PCLAFQ15004 111 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 TBCCQ15814 346 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 HIST2H2ACQ16777 129 aaPredicted RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
MMP11-212ENST00000492464 ZNF678Q5SXM1 525 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 HIST2H2AA3Q6FI13 130 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 FBXO42Q6P3S6 717 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 MYLK4Q86YV6 388 aaPredicted RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 PLD3Q8IV08 490 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 C10orf107Q8IVU9 208 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 OR1L3Q8NH93 324 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 SLC46A1Q96NT5 459 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 NSUN5Q96P11 429 aaKnown RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 FCRL4Q96PJ5 515 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 NLNQ9BYT8 704 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 PITHD1Q9GZP4 211 aaPredicted RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 DRC3Q9H069 523 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 NOL11Q9H8H0 719 aaKnown RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 IPPKQ9H8X2 491 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 ACTR8Q9H981 624 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 PRM3Q9NNZ6 103 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 SEMA4BQ9NPR2 832 aaPredicted RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 THSD1Q9NS62 852 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 GEMIN8Q9NWZ8 242 aaKnown RBP13.52□□□□□ -0.25
MMP11-212ENST00000492464 NKIRAS1Q9NYS0 192 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 STK38LQ9Y2H1 464 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 PCDHGA3Q9Y5H0 932 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 B3GALT1Q9Y5Z6 326 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.25
MMP11-212ENST00000492464 APC2O95996 2303 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 NUP210LQ5VU65 1888 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 KCNE1BA0A087WTH5 132 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 LOC105369274A0A096LPK9 316 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 LOC102723532A0A0G2JNH3 316 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 TMEM120BA0PK00 339 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 H0YGG7 62 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 TXNDC9O14530 226 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 NVLO15381 856 aaKnown RBP13.51□□□□□ -0.25
MMP11-212ENST00000492464 ZSCAN9O15535 394 aaPredicted RBP13.51□□□□□ -0.25
MMP11-212ENST00000492464 HCRTR1O43613 425 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 UGDHO60701 494 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 TRIM13O60858 407 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 OTCP00480 354 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 EIF2S1P05198 315 aaKnown RBP13.51□□□□□ -0.25
MMP11-212ENST00000492464 ALDH3A1P30838 453 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 SLC5A2P31639 672 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 BCL6P41182 706 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 ARF3P61204 181 aaPredicted RBP13.51□□□□□ -0.25
MMP11-212ENST00000492464 CLCQ05315 142 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 DOC2AQ14183 400 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 RBBP5Q15291 538 aaKnown RBP13.51□□□□□ -0.25
MMP11-212ENST00000492464 UNC50Q53HI1 259 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 TTMPQ5BVD1 217 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 FRMPD2BQ6IN97 320 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 TLDC1Q6P9B6 456 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 TMIGD1Q6UXZ0 262 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 OR4N4Q8N0Y3 316 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 ZNF655Q8N720 491 aaPredicted RBP13.51□□□□□ -0.25
MMP11-212ENST00000492464 ANKRD42Q8N9B4 389 aa13.51□□□□□ -0.25
MMP11-212ENST00000492464 TTC29Q8NA56 475 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms