RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 M0QYV0 167 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 AP3B1O00203 1094 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TAF4O00268 1085 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 EIF3FO00303 357 aaPredicted RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 UBDO15205 165 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 PHGDHO43175 533 aaKnown RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 HOXC11O43248 304 aaPredicted RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CACNG3O60359 315 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 SYNCRIPO60506 623 aaKnown RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TULP3O75386 442 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 GPC4O75487 556 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 RFPL2O75678 378 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 UPK1BO75841 260 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 MYO1DO94832 1006 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 PCDH8O95206 1070 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 LDLRP01130 860 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ALPLP05186 524 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CCDC159P0C7I6 412 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 PRR35P0CG20 571 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 STAG3L1P0CL83 205 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TRAPPC2P0DI81 140 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TRAPPC2BP0DI82 140 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ERVK-10P10266 1014 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 THRBP10828 461 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 DARSP14868 501 aaKnown RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CD19P15391 556 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CSF2RAP15509 400 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 HOXB6P17509 224 aaKnown RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TCN1P20061 433 aaPredicted RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CAPN3P20807 821 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TCEA1P23193 301 aaKnown RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CXCR2P25025 360 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 HTR1EP28566 365 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ADORA2BP29275 332 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 IL12AP29459 219 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 EEF1DP29692 281 aaKnown RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 OXTRP30559 389 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 HOXA11P31270 313 aaPredicted RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 SDC4P31431 198 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ATICP31939 592 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 SHMT2P34897 504 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CA8P35219 290 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC26A3P40879 764 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CASP3P42574 277 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ACADSBP45954 432 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 RECQLP46063 649 aaPredicted RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CCR10P46092 362 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 KRT6CP48668 564 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 NPY2RP49146 381 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 RGS7P49802 495 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 GSK3BP49841 420 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CPT1AP50416 773 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 NDST1P52848 882 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 PPP5CP53041 499 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 NAGLUP54802 743 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TPTEP56180 551 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 PPP2R2BQ00005 443 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TLE2Q04725 743 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 FADDQ13158 208 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 BFSP2Q13515 415 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 DAG1Q14118 895 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 E2F2Q14209 437 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 GALEQ14376 348 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 PAFAH1B3Q15102 231 aaKnown RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 SF3B4Q15427 424 aaKnown RBP eCLIP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 UGP2Q16851 508 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 GEN1Q17RS7 908 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ZNF181Q2M3W8 571 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 C15orf59Q2T9L4 293 aaPredicted RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 FAM214AQ32MH5 1076 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 UGT3A2Q3SY77 523 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 AGKQ53H12 422 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 SMUG1Q53HV7 270 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 FBXO47Q5MNV8 452 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 C6orf141Q5SZD1 244 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 C6orf183Q5T699 404 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 SYT6Q5T7P8 510 aaPredicted RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ATAD3BQ5T9A4 648 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ARHGAP17Q68EM7 881 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 TWF2Q6IBS0 349 aaKnown RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CFAP161Q6P656 301 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CNSTQ6PJW8 725 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 FAM111BQ6SJ93 734 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 PRSS55Q6UWB4 352 aaPredicted RBP3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 USP43Q70EL4 1123 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 LRRC8DQ7L1W4 858 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ZNF627Q7L945 461 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 GALNT7Q86SF2 657 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 AKAP14Q86UN6 197 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 CUZD1Q86UP6 607 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 C11orf74Q86VG3 221 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 KCNMB4Q86W47 210 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 HEATR4Q86WZ0 1026 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ZNF280BQ86YH2 543 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 LRRC49Q8IUZ0 686 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 FUNDC1Q8IVP5 155 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 C1orf210Q8IVY1 113 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 MFSD6LQ8IWD5 586 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 ZBTB8OSQ8IWT0 167 aa3.36□□□□□ -1.87
CRNKL1-203ENST00000490258 RIMKLAQ8IXN7 391 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms