RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CHAF1BQ13112 559 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 NAB1Q13506 487 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 GARNL3Q5VVW2 1013 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 PRMT9Q6P2P2 845 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 ADAMTSL2Q86TH1 951 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 C9orf43Q8TAL5 461 aaPredicted RBP15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 TM4SF19Q96DZ7 209 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 THAP11Q96EK4 314 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 SARGQ9BW04 601 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 FUT8Q9BYC5 575 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 UNKQ9C0B0 810 aaKnown RBP15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 ING2Q9H160 280 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 WDR54Q9H977 334 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 ZNF304Q9HCX3 659 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 CTSFQ9UBX1 484 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 MRPS2Q9Y399 296 aaKnown RBP15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 IGLV3-12A0A075B6K2 115 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 FEZF1A0PJY2 475 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 ARGFXA6NJG6 315 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 RFPL1O75677 317 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 CD1DP15813 335 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 BCL6P41182 706 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 FOLR3P41439 243 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 KCNC1P48547 511 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 CSRP3P50461 194 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 RPS15AP62244 130 aaKnown RBP15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 ATP1A4Q13733 1029 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 TGFBIQ15582 683 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 C18orf21Q32NC0 220 aaPredicted RBP15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 PPP1R32Q7Z5V6 425 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 MRGPREQ86SM8 312 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 CEP112Q8N8E3 955 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 IFT81Q8WYA0 676 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 NEIL2Q969S2 332 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 RERGQ96A58 199 aaPredicted RBP15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 RHBDF1Q96CC6 855 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 MVB12AQ96EY5 273 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 CABS1Q96KC9 395 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 MACROD1Q9BQ69 325 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 MLXIPLQ9NP71 852 aa15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 ZNF71Q9NQZ8 489 aaPredicted RBP15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 MTRF1LQ9UGC7 380 aaKnown RBP15.18■□□□□ 0.02
CTDSP1-209ENST00000488627 ZNF462Q96JM2 2506 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 TXNDC9O14530 226 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 CEACAM4O75871 244 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 STATHP02808 62 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 PDGFAP04085 211 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 ANXA5P08758 320 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 SLC35E2BP0CK96 405 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 OTX2P32243 289 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 SLC26A3P40879 764 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 CCL11P51671 97 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 CCR8P51685 355 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 DLG1Q12959 904 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 FAM53BQ14153 422 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 OR4D1Q15615 310 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 CATSPEREQ5SY80 951 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 TCTN3Q6NUS6 607 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 CMC1Q7Z7K0 106 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 THOC6Q86W42 341 aaKnown RBP15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 RAB43Q86YS6 212 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 KLHDC8AQ8IYD2 350 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 AMER3Q8N944 861 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 TMEM102Q8N9M5 508 aaPredicted RBP15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 ZNF740Q8NDX6 193 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 NACC2Q96BF6 587 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 IP6K3Q96PC2 410 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 FMO2Q99518 471 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 TSPYL1Q9H0U9 437 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 SPNS1Q9H2V7 528 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 CDC42EP4Q9H3Q1 356 aaKnown RBP15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 ACSS3Q9H6R3 686 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 SLC22A14Q9Y267 594 aa15.17■□□□□ 0.02
CTDSP1-209ENST00000488627 PCSK5Q92824 1860 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 PABPN1LA6NDY0 278 aaKnown RBP15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 MKRN2OSH3BPM6 223 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 TAPBPO15533 448 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 MMP11P24347 488 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 GDF5P43026 501 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 SLC6A12P48065 614 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 HNMTP50135 292 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 ATP6V0D1P61421 351 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 DSG2Q14126 1118 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 CSHL1Q14406 222 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 CDKL4Q5MAI5 379 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 TMEM214Q6NUQ4 689 aaKnown RBP15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 SHISA6Q6ZSJ9 500 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 CEP128Q6ZU80 1094 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 MED25Q71SY5 747 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 ZNF605Q86T29 641 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 ISCA2Q86U28 154 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 SHISA5Q8N114 240 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 MFSD9Q8NBP5 474 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 LRRN4CLQ8ND94 238 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 STT3BQ8TCJ2 826 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 SLC5A11Q8WWX8 675 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 KIAA1191Q96A73 305 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 COL26A1Q96A83 441 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 CYTH2Q99418 400 aa15.16■□□□□ 0.02
CTDSP1-209ENST00000488627 DRC3Q9H069 523 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms