RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PCDHGB7Q9Y5F8 929 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 A0A0A6YYC8 382 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 I3L1I5 382 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 TXNDC9O14530 226 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 PRPF4O43172 522 aaKnown RBP eCLIP16.88■□□□□ 0.291e-9■■□□□ 12.7
ITGB1-215ENST00000488494 GUCA1CO95843 209 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 ANXA5P08758 320 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 ENO2P09104 434 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 ZGLP1P0C6A0 271 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 SSTR1P30872 391 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 BCL6P41182 706 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 MLLT10P55197 1068 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 TAS2R39P59534 338 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 RPS15AP62244 130 aaKnown RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 SNRPNP63162 240 aaKnown RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 CSNK1G2P78368 415 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 MYBPC3Q14896 1274 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 PPP1R3AQ16821 1122 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 ZXDCQ2QGD7 858 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 GARNL3Q5VVW2 1013 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 CAPN13Q6MZZ7 669 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 VN1R4Q7Z5H5 301 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 AMER3Q8N944 861 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 NACC2Q96BF6 587 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 PYCR2Q96C36 320 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 FBXL8Q96CD0 374 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 MMABQ96EY8 250 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 VPS39Q96JC1 886 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 C16orf45Q96MC5 204 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 SMAD5Q99717 465 aaKnown RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 MESP1Q9BRJ9 268 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 MFRPQ9BY79 579 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 RAB17Q9H0T7 212 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 RHOJQ9H4E5 214 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 LUZP4Q9P127 313 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 TRPC4Q9UBN4 977 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 CDC14AQ9UNH5 594 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 PLAAQ9Y263 795 aa16.88■□□□□ 0.29
ITGB1-215ENST00000488494 MRPS2Q9Y399 296 aaKnown RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 PRRC2CQ9Y520 2896 aaKnown RBP16.88■□□□□ 0.29
ITGB1-215ENST00000488494 CCDC88CQ9P219 2028 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 HEATR5BQ9P2D3 2071 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 EIF3HO15372 352 aaKnown RBP eCLIP16.87■□□□□ 0.29
ITGB1-215ENST00000488494 DPM1O60762 260 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 ALPPP05187 535 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 KIRREL2Q6UWL6 708 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 LCTLQ6UWM7 567 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 ZNF572Q7Z3I7 529 aaPredicted RBP16.87■□□□□ 0.29
ITGB1-215ENST00000488494 CCDC25Q86WR0 208 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 CEP97Q8IW35 865 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 OR56A3Q8NH54 315 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 ATL1Q8WXF7 558 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 PDLIM5Q96HC4 596 aaKnown RBP16.87■□□□□ 0.29
ITGB1-215ENST00000488494 MACROD1Q9BQ69 325 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 HAUS8Q9BT25 410 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 MCMBPQ9BTE3 642 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 YIPF2Q9BWQ6 316 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 C14orf105Q9NVL8 296 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 C3orf18Q9UK00 162 aa16.87■□□□□ 0.29
ITGB1-215ENST00000488494 IGLV3-12A0A075B6K2 115 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 TCRBV9S1A1TA0A576 114 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 FEZF1A0PJY2 475 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 CXorf49A8MYA2 514 aaPredicted RBP16.86■□□□□ 0.29
ITGB1-215ENST00000488494 CDC7O00311 574 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 FOXS1O43638 330 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 SORBS2O94875 1100 aaKnown RBP16.86■□□□□ 0.29
ITGB1-215ENST00000488494 NPPBP16860 134 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 ITGA3P26006 1051 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 SLC26A3P40879 764 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 PLTPP55058 493 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 CKAP4Q07065 602 aaKnown RBP16.86■□□□□ 0.29
ITGB1-215ENST00000488494 AIMP2Q13155 320 aaKnown RBP16.86■□□□□ 0.29
ITGB1-215ENST00000488494 NDUFA9Q16795 377 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 TUBB8Q3ZCM7 444 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 VWA2Q5GFL6 755 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 HPS6Q86YV9 775 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 NKAPQ8N5F7 415 aaKnown RBP16.86■□□□□ 0.29
ITGB1-215ENST00000488494 OR11G2Q8NGC1 345 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 ZCCHC10Q8TBK6 192 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 FBXO25Q8TCJ0 367 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 ANKRD49Q8WVL7 239 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 CDKL2Q92772 493 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 MIB2Q96AX9 1013 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 TSNARE1Q96NA8 513 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 OR4K3Q96R72 315 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 ATP13A2Q9NQ11 1180 aa16.86■□□□□ 0.29
ITGB1-215ENST00000488494 NOVA2Q9UNW9 492 aaKnown RBP16.86■□□□□ 0.29
ITGB1-215ENST00000488494 FLNBO75369 2602 aaKnown RBP16.86■□□□□ 0.29
ITGB1-215ENST00000488494 MDC1Q14676 2089 aaKnown RBP16.85■□□□□ 0.29
ITGB1-215ENST00000488494 KCNE1BA0A087WTH5 132 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 TTLL8A6PVC2 850 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 MAP2K7O14733 419 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 ACPPP15309 386 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 GRK3P35626 688 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 CD97P48960 835 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 CCR8P51685 355 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 SLC12A2P55011 1212 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 MAT1AQ00266 395 aaKnown RBP16.85■□□□□ 0.29
ITGB1-215ENST00000488494 MEF2AQ02078 507 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms