RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 Q6ZPB1 254 aaPredicted RBP18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 CPEB2Q7Z5Q1 589 aaKnown RBP18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 SYCE1Q8N0S2 351 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 SHISA5Q8N114 240 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 TXLNBQ8N3L3 684 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 OTUD6BQ8N6M0 293 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 THAP3Q8WTV1 239 aaPredicted RBP18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 LPGAT1Q92604 370 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 SIGLEC12Q96PQ1 595 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 UTP6Q9NYH9 597 aaKnown RBP18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 ZNF148Q9UQR1 794 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 PCDHGB6Q9Y5F9 930 aa18.39■□□□□ 0.53
SMPDL3A-202ENST00000487215 HIVEP1P15822 2718 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 TXNDC9O14530 226 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 TTI1O43156 1089 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 PSIP1O75475 530 aaKnown RBP18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 CCNDBP1O95273 360 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 CLDN14O95500 239 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 ARNTP27540 789 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 KIR3DL1P43629 444 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 PNLIPRP1P54315 467 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 RELAQ04206 551 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 TUBA3CQ13748 450 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 ACSBG2Q5FVE4 666 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 ACER2Q5QJU3 275 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 H3F3CQ6NXT2 135 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 TUBA3EQ6PEY2 450 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 SPPL2CQ8IUH8 684 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 PLD3Q8IV08 490 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 PPFIBP2Q8ND30 876 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 MDS2Q8NDY4 140 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 OR9A4Q8NGU2 314 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 HES6Q96HZ4 224 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 ZNF354BQ96LW1 612 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 CYTH2Q99418 400 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 PKP4Q99569 1192 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 HES7Q9BYE0 225 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 TSPAN10Q9H1Z9 355 aaPredicted RBP18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 FAM114A2Q9NRY5 505 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 PAK5Q9P286 719 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 GALPQ9UBC7 116 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 MEMO1Q9Y316 297 aa18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 NCOA6Q14686 2063 aaPredicted RBP18.38■□□□□ 0.53
SMPDL3A-202ENST00000487215 TACC2O95359 2948 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 HAT1O14929 419 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 STATHP02808 62 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 ZSCAN5DPP0CG00 497 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 AVPR1BP47901 424 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 ST13P50502 369 aaKnown RBP18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 ALDH6A1Q02252 535 aaKnown RBP18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 TESK1Q15569 626 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 NDUFA9Q16795 377 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 TYSND1Q2T9J0 566 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 KLHL38Q2WGJ6 581 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 MINDY4Q4G0A6 757 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 MFSD4BQ5TF39 518 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 NCCRP1Q6ZVX7 275 aaPredicted RBP18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 ADCK2Q7Z695 626 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 KIAA1328Q86T90 577 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 C1orf54Q8WWF1 131 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 FRMD8P1Q9BZ68 369 aaPredicted RBP18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 KLHL1Q9NR64 748 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 ANKRD10Q9NXR5 420 aa18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 C19orf25Q9UFG5 118 aaPredicted RBP18.37■□□□□ 0.53
SMPDL3A-202ENST00000487215 ASPDHA6ND91 283 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 GOLGA8KD6RF30 607 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 H0YIG0 161 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 H3BMM5 538 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 GOLGA8TH3BQL2 631 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 SMAPO00193 183 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 SLC16A8O95907 504 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 ESR1P03372 595 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 CATP04040 527 aaKnown RBP18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 CYC1P08574 325 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 CHRM3P20309 590 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 HSD17B2P37059 387 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 ZNF75DP51815 510 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 ABATP80404 500 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 SNX1Q13596 522 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 KCNJ11Q14654 390 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 OR1C1Q15619 314 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 KRTCAP3Q53RY4 240 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 RNF187Q5TA31 235 aaPredicted RBP18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 MRNIPQ6NTE8 343 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 PRSS41Q7RTY9 318 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 CRLF3Q8IUI8 442 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 CCDC89Q8N998 374 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 ZNF480Q8WV37 535 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 MFSD3Q96ES6 412 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 C14orf79Q96F83 325 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 SCMH1Q96GD3 660 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 FRMD6Q96NE9 622 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 NPAS2Q99743 824 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 IL22Q9GZX6 179 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 KCNK13Q9HB14 408 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 EIF2B3Q9NR50 452 aaKnown RBP18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 ABCF3Q9NUQ8 709 aa18.36■□□□□ 0.53
SMPDL3A-202ENST00000487215 OR2W5A6NFC9 320 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 ZNF839A8K0R7 811 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 E7ENX8 843 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms