RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ANKRD49Q8WVL7 239 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 FBXL20Q96IG2 436 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 CITED4Q96RK1 184 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 EXD2Q9NVH0 621 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 AXIN1O15169 862 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 EBLN1P0CF75 366 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 MYBPC1Q00872 1141 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 RFTN2Q52LD8 501 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 PIGGQ5H8A4 983 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 DGKKQ5KSL6 1271 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SPANXN4Q5MJ08 99 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SLC8B1Q6J4K2 584 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SLC22A16Q86VW1 577 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 ZDHHC21Q8IVQ6 265 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 PIK3R3Q92569 461 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SLC45A3Q96JT2 553 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 MGME1Q9BQP7 344 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SLC29A3Q9BZD2 475 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 LINC00597Q9H2U6 94 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 PTGDR2Q9Y5Y4 395 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 B4DGG1 531 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 PLK4O00444 970 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 PRMT3O60678 531 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 RSL1D1O76021 490 aaKnown RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 CDH1P12830 882 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 PCSK2P16519 638 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 FDXRP22570 491 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 CDKN1CP49918 316 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 RAB25P57735 213 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 C6orf136Q5SQH8 315 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 PLEKHM3Q6ZWE6 761 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SETD7Q8WTS6 366 aaKnown RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 TMCO6Q96DC7 493 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 KLHDC7BQ96G42 594 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 HCFC1R1Q9NWW0 138 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 NCDNQ9UBB6 729 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 TAC3Q9UHF0 121 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 CD207Q9UJ71 328 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 KCNK6Q9Y257 313 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 TNFRSF11BO00300 401 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 TSPAN19P0C672 248 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 GSTM5P46439 218 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 GRB7Q14451 532 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 EIF4HQ15056 248 aaKnown RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 OR4D1Q15615 310 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SUSD1Q6UWL2 747 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 FIBINQ8TAL6 211 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 FCGR1BQ92637 280 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 RNF38Q9H0F5 515 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 HTR3EA5X5Y0 456 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 DRGXA6NNA5 263 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 NOTOA8MTQ0 251 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 CLIC1O00299 241 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SMAD6O43541 496 aaKnown RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 TSPAN6O43657 245 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 ATF6P18850 670 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 DHCR24Q15392 516 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 SPATS1Q496A3 300 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 TNFAIP8L2Q6P589 184 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 ISCA2Q86U28 154 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 ADGRG2Q8IZP9 1017 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 ZNF382Q96SR6 550 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 C8orf33Q9H7E9 229 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 MRPS30Q9NP92 439 aaKnown RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 GSTK1Q9Y2Q3 226 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 TESMINQ9Y4I5 508 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 CEPT1Q9Y6K0 416 aa10.7□□□□□ -0.7
HDAC6-228ENST00000486227 URB1O60287 2271 aaKnown RBP10.7□□□□□ -0.7
HDAC6-228ENST00000486227 G3V2L1 256 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 H3BQ06 376 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-228ENST00000486227 KAT7O95251 611 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 PAK4O96013 591 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-228ENST00000486227 IFNW1P05000 195 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 PGRP06401 933 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 ITIH1P19827 911 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 ACRV1P26436 265 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 HSD17B2P37059 387 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 GRIA2P42262 883 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 CTSKP43235 329 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 STXBP1P61764 594 aaKnown RBP10.69□□□□□ -0.7
HDAC6-228ENST00000486227 EMX2Q04743 252 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 PPP1R8Q12972 351 aaKnown RBP10.69□□□□□ -0.7
HDAC6-228ENST00000486227 KHDRBS2Q5VWX1 349 aaKnown RBP10.69□□□□□ -0.7
HDAC6-228ENST00000486227 PLET1Q6UQ28 207 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 MBOAT1Q6ZNC8 495 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 SYVN1Q86TM6 617 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 TEFMQ96QE5 360 aaKnown RBP10.69□□□□□ -0.7
HDAC6-228ENST00000486227 EHD1Q9H4M9 534 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 CDC14AQ9UNH5 594 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 ERGIC3Q9Y282 383 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 LAMB2P55268 1798 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 A0A1W2PRB8 838 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 WASH4PA8MWX3 477 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 GSRP00390 522 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 GBAP04062 536 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 ZNF8P17098 575 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-228ENST00000486227 BPIP17213 487 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 SLC5A2P31639 672 aa10.69□□□□□ -0.7
HDAC6-228ENST00000486227 FEN1P39748 380 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms