RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 NUDCD3Q8IVD9 361 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 LAS2Q8IYD9 372 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CHCHD4Q8N4Q1 142 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ARHGEF39Q8N4T4 335 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 DNAJC22Q8N4W6 341 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ARFGAP2Q8N6H7 521 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 SNX31Q8N9S9 440 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 AGBL5Q8NDL9 886 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 RCBTB1Q8NDN9 531 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 OR4F6Q8NGB9 312 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 MGARPQ8TDB4 240 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 SREK1Q8WXA9 508 aaKnown RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 ZNF501Q96CX3 271 aaPredicted RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 THAP11Q96EK4 314 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 MOCOSQ96EN8 888 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 PTCD3Q96EY7 689 aaKnown RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 MS4A3Q96HJ5 214 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CNDP1Q96KN2 507 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 PRAP1Q96NZ9 151 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 OR2A5Q96R48 311 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 SORT1Q99523 831 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ZFYVE21Q9BQ24 234 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ZMYND15Q9H091 742 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 RHBGQ9H310 441 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CCDC134Q9H6E4 229 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 SYNDIG1Q9H7V2 258 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 NOL11Q9H8H0 719 aaKnown RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 ACSS2Q9NR19 701 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ABCF3Q9NUQ8 709 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 INTS9Q9NV88 658 aaKnown RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 PPT2Q9UMR5 302 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 WASF3Q9UPY6 502 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 KLHL20Q9Y2M5 609 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ANGPTL3Q9Y5C1 460 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 PCDHGA4Q9Y5G9 962 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 NUP210LQ5VU65 1888 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 FER1L5A0AVI2 2057 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 CCDC187A0A096LP49 1063 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 DCDC2BA2VCK2 349 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 FITM1A5D6W6 292 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 HYAL3O43820 417 aaPredicted RBP6.15□□□□□ -1.42
NCL-209ENST00000484328 PRAMEF10O60809 474 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 TBX6O95947 436 aaPredicted RBP6.15□□□□□ -1.42
NCL-209ENST00000484328 ENO1P06733 434 aaKnown RBP6.15□□□□□ -1.42
NCL-209ENST00000484328 FGF4P08620 206 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 JUPP14923 745 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 FOLR1P15328 257 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 TSPAN8P19075 237 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 VARSP26640 1264 aaKnown RBP6.15□□□□□ -1.42
NCL-209ENST00000484328 SERPINB1P30740 379 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 AHRP35869 848 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 BCL6P41182 706 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 CCR10P46092 362 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 SCTRP47872 440 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 SEPHS1P49903 392 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 CCNG1P51959 295 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 EMP3P54852 163 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 SH3BP2P78314 561 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 OCRLQ01968 901 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 MEF2AQ02078 507 aaPredicted RBP6.15□□□□□ -1.42
NCL-209ENST00000484328 BST1Q10588 318 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 LAPTM5Q13571 262 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 KCNAB1Q14722 419 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 ADPRMQ3LIE5 342 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 CCDC157Q569K6 752 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 ARL13AQ5H913 290 aaPredicted RBP6.15□□□□□ -1.42
NCL-209ENST00000484328 ZC3H12BQ5HYM0 836 aaKnown RBP6.15□□□□□ -1.42
NCL-209ENST00000484328 CFAP157Q5JU67 520 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 KANK2Q63ZY3 851 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 FRMPD2BQ6IN97 320 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 ADNP2Q6IQ32 1131 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 FBXO42Q6P3S6 717 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 CYB5D1Q6P9G0 228 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 IGF2-ASQ6U949 168 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 TMIGD1Q6UXZ0 262 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 SYVN1Q86TM6 617 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 TRIM42Q8IWZ5 723 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.15□□□□□ -1.42
NCL-209ENST00000484328 GALNT15Q8N3T1 639 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 CCNYL1Q8N7R7 359 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 ANKRD53Q8N9V6 530 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 MFSD9Q8NBP5 474 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 ZNF740Q8NDX6 193 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 OR7G3Q8NG95 312 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 OR8K5Q8NH50 307 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 WDR20Q8TBZ3 569 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 TRPC4APQ8TEL6 797 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 PPP4R1Q8TF05 950 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 CKAP2Q8WWK9 683 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 USP7Q93009 1102 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 UBE2E3Q969T4 207 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 TM4SF19Q96DZ7 209 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 PRR11Q96HE9 360 aaPredicted RBP6.15□□□□□ -1.42
NCL-209ENST00000484328 FCRL4Q96PJ5 515 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 CDK15Q96Q40 435 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 AIF1LQ9BQI0 150 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 SLC29A3Q9BZD2 475 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 B3GNT4Q9C0J1 378 aa6.15□□□□□ -1.42
NCL-209ENST00000484328 STRADBQ9C0K7 418 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms