RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 IGLV3-19P01714 112 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 TPBGLP0DKB5 382 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 SRCP12931 536 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 COX7A2P14406 83 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ERCC2P18074 760 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 GABRB1P18505 474 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 POLR2EP19388 210 aaKnown RBP6.4□□□□□ -1.38
CLK1-212ENST00000482590 HOXD9P28356 352 aaPredicted RBP6.4□□□□□ -1.38
CLK1-212ENST00000482590 HLA-FP30511 346 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 MAGEA4P43358 317 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 PTDSS1P48651 473 aaKnown RBP6.4□□□□□ -1.38
CLK1-212ENST00000482590 KHKP50053 298 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 RAD23BP54727 409 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ST8SIA6P61647 398 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 GPS1Q13098 491 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 RPS6KA1Q15418 735 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 C15orf59Q2T9L4 293 aaPredicted RBP6.4□□□□□ -1.38
CLK1-212ENST00000482590 ZCWPW2Q504Y3 356 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 MANEALQ5VSG8 457 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ABHD17BQ5VST6 288 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ABLIM2Q6H8Q1 611 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 HEPHL1Q6MZM0 1159 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ISLR2Q6UXK2 745 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 TICAM1Q8IUC6 712 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 SFRP1Q8N474 314 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 TNIP2Q8NFZ5 429 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 GANCQ8TET4 914 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ZNF480Q8WV37 535 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ASB10Q8WXI3 467 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 SORCS1Q8WY21 1168 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 SEMA4DQ92854 862 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ALG14Q96F25 216 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 P2RY11Q96G91 374 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 AGAP3Q96P47 875 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 CCDC106Q9BWC9 280 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 HEMGNQ9BXL5 484 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 TINAGL1Q9GZM7 467 aaPredicted RBP6.4□□□□□ -1.38
CLK1-212ENST00000482590 CNGB3Q9NQW8 809 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ABCC13Q9NSE7 274 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 CNIH4Q9P003 139 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 LRIT1Q9P2V4 623 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 AMACRQ9UHK6 382 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 GGA2Q9UJY4 613 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 CLEC4EQ9ULY5 219 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 NCKAP1Q9Y2A7 1128 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ENTPD2Q9Y5L3 495 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 CELSR3Q9NYQ7 3312 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ARPC4-TTLL3A0A0A6YYG9 625 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 FAM237AA0A1B0GTK4 181 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 A0A1B0GVT2 93 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 SLC9B1P1A6NJY1 282 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MARCH11A6NNE9 402 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ENO4A6NNW6 628 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 M0QYV0 167 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 TULP2O00295 520 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MAGEB3O15480 346 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MSI1O43347 362 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 PRAMEF4O60810 478 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 TBL1XO60907 577 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 RNASEH1O60930 286 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 SPDEFO95238 335 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ZFXP17010 805 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 CXCR5P32302 372 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 TTKP33981 857 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 CSNK1EP49674 416 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 RGS7P49802 495 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 CAPZA1P52907 286 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 GBX2P52951 348 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 DAOAP59103 153 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 RIPK1Q13546 671 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 STIM1Q13586 685 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 CDH18Q13634 790 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 HLA-BQ31612 363 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ZNF750Q32MQ0 723 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 CBWD6Q4V339 395 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 SLC9B1Q4ZJI4 515 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 CBWD3Q5JTY5 395 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 FAM102AQ5T9C2 384 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 SHEQ5VZ18 495 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 BSPRYQ5W0U4 402 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 METRNLQ641Q3 311 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 TMEM215Q68D42 235 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ZNF776Q68DI1 518 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 PM20D1Q6GTS8 502 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ZYG11AQ6WRX3 759 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MED25Q71SY5 747 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MARK2Q7KZI7 788 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 GAS2L3Q86XJ1 694 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MFN1Q8IWA4 741 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 ARHGAP12Q8IWW6 846 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 FAM185AQ8N0U4 392 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLK1-212ENST00000482590 PTGR2Q8N8N7 351 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 HJURPQ8NCD3 748 aaPredicted RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 PSMA8Q8TAA3 256 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 UBA3Q8TBC4 463 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 MDM1Q8TC05 714 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 NDRG1Q92597 394 aaKnown RBP6.39□□□□□ -1.39
CLK1-212ENST00000482590 RAB7BQ96AH8 199 aa6.39□□□□□ -1.39
CLK1-212ENST00000482590 FAM149B1Q96BN6 582 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms