RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 LIN54Q6MZP7 749 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 LRRTM4Q86VH4 590 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 INTS7Q9NVH2 962 aaKnown RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ZNF224Q9NZL3 707 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 STOML2Q9UJZ1 356 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 DFNA5O60443 496 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 GABBR2O75899 941 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 SNX4O95219 450 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 GADD45GO95257 159 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 TIE1P35590 1138 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 APLP1P51693 650 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 IL18Q14116 193 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ABRAXAS2Q15018 415 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ATP13A5Q4VNC0 1218 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 TAS1R1Q7RTX1 841 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 TCEAL8Q8IYN2 117 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 CHCHD4Q8N4Q1 142 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 HERVK_113Q902F9 699 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 TRIB3Q96RU7 358 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ZNF347Q96SE7 839 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 SLC35A5Q9BS91 424 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 COPS4Q9BT78 406 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 BOCQ9BWV1 1114 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 COMMD9Q9P000 198 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 DLEC1Q9Y238 1755 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 NOS1APO75052 506 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 RSL1D1O76021 490 aaKnown RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 CCNB2O95067 398 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 RASGRP1O95267 797 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 GSRP00390 522 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 KLK1P06870 262 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 FSHRP23945 695 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 MYL9P24844 172 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 GABRB3P28472 473 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ARCN1P48444 511 aaKnown RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 CLCNKAP51800 687 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ILF3Q12906 894 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 MTAPQ13126 283 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 AKIRIN2Q53H80 203 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 C2orf27AQ580R0 203 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ZNF805Q5CZA5 627 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 CXXC5Q7LFL8 322 aaKnown RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 TMCO2Q7Z6W1 182 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 UBE2J2Q8N2K1 259 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 SLC9A6Q92581 669 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 PTBP2Q9UKA9 531 aaKnown RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ANXA8P13928 327 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 DNAJA1P31689 397 aaKnown RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 CD70P32970 193 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ADRA1AP35348 466 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ALDH3A2P51648 485 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 CCR8P51685 355 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 IST1P53990 364 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 PHC1P78364 1004 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 MS4A2Q01362 244 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 KANK2Q63ZY3 851 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 SLC39A5Q6ZMH5 540 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 FIBINQ8TAL6 211 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 PIK3R3Q92569 461 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 C11orf24Q96F05 449 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 AURKBQ96GD4 344 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 PYURFQ96I23 114 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 GFM1Q96RP9 751 aaKnown RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 OR51B5Q9H339 312 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 MCUBQ9NWR8 336 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 HCSTQ9UBK5 93 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SORBS2O94875 1100 aaKnown RBP13.9□□□□□ -0.18
COL20A1-206ENST00000479501 BCKDHAP12694 445 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 CD36P16671 472 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 HTR1EP28566 365 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 STARP49675 285 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 PRR5P85299 388 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 MXD1Q05195 221 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SLC8B1Q6J4K2 584 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 NOXRED1Q6NXP6 359 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 TMIGD1Q6UXZ0 262 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 TSPAN33Q86UF1 283 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 FAM20CQ8IXL6 584 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 GLYATL1Q969I3 302 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SCRN2Q96FV2 425 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 RTP3Q9BQQ7 232 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 AMBNQ9NP70 447 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 ZCCHC3Q9NUD5 404 aaKnown RBP13.9□□□□□ -0.18
COL20A1-206ENST00000479501 TBCCD1Q9NVR7 557 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 ELOVL2Q9NXB9 296 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SNX7Q9UNH6 387 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 MRPS33Q9Y291 106 aaKnown RBP13.9□□□□□ -0.18
COL20A1-206ENST00000479501 CFAP20Q9Y6A4 193 aaKnown RBP13.9□□□□□ -0.18
COL20A1-206ENST00000479501 A0A0U1RQS6 177 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 TSPAN6O43657 245 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 CLIC3O95833 236 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 C9P02748 559 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 OPN1SWP03999 348 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SLC35G6P0C7Q6 338 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 GM2AP17900 193 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SCARB2Q14108 478 aa13.9□□□□□ -0.18
COL20A1-206ENST00000479501 SYT16Q17RD7 645 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms