RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 KCNH6Q9H252 994 aa13.02□□□□□ -0.32
DFFB-209ENST00000477548 FAM83DQ9H4H8 585 aa13.02□□□□□ -0.32
DFFB-209ENST00000477548 PIN4Q9Y237 131 aaKnown RBP13.02□□□□□ -0.32
DFFB-209ENST00000477548 FNDC3AQ9Y2H6 1198 aaKnown RBP13.02□□□□□ -0.32
DFFB-209ENST00000477548 ARPC4-TTLL3A0A0A6YYG9 625 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 SNTNA6NMZ2 147 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 FADS2P1A8MWK0 482 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 ALPPP05187 535 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 RPS19P39019 145 aaKnown RBP13.02□□□□□ -0.33
DFFB-209ENST00000477548 GNPDA1P46926 289 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 SMARCB1Q12824 385 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 TOR2AQ5JU69 321 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 DGLUCYQ7Z3D6 616 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 LRRC20Q8TCA0 184 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 FARSBQ9NSD9 589 aaKnown RBP13.02□□□□□ -0.33
DFFB-209ENST00000477548 SNTG1Q9NSN8 517 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 TMEM39AQ9NV64 488 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 HSPB11Q9Y547 144 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 NYNRINQ9P2P1 1898 aaKnown RBP13.02□□□□□ -0.33
DFFB-209ENST00000477548 A0A0B4J293 547 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 LEUTXA8MZ59 168 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 GPX5O75715 221 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 SCO1O75880 301 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 TSPAN12O95859 305 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 B3GALT4O96024 378 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 FGF1P05230 155 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 ASAH1Q13510 395 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 GRIK4Q16099 956 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 PXDC1Q5TGL8 231 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 MLIPQ5VWP3 458 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 XKRXQ6PP77 449 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 SUSD1Q6UWL2 747 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 NLRP8Q86W28 1048 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 RDH10Q8IZV5 341 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 OR4M1Q8NGD0 313 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 ARRDC2Q8TBH0 407 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 RNF31Q96EP0 1072 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 SENP8Q96LD8 212 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 GABARAPL3Q9BY60 117 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 LRTM1Q9HBL6 345 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 RIMKLBQ9ULI2 386 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 CCL27Q9Y4X3 112 aa13.02□□□□□ -0.33
DFFB-209ENST00000477548 H3BM21 787 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 TSC22D2O75157 780 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 CDKN2CP42773 168 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 RORCP51449 518 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 MAPK12P53778 367 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 ITGA1P56199 1179 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 C5orf22Q49AR2 442 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 PDE12Q6L8Q7 609 aaKnown RBP13.01□□□□□ -0.33
DFFB-209ENST00000477548 DNAJB8Q8NHS0 232 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 VANGL1Q8TAA9 524 aaPredicted RBP13.01□□□□□ -0.33
DFFB-209ENST00000477548 PEX13Q92968 403 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 NUDT4Q9NZJ9 180 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 TNPO3Q9Y5L0 923 aaKnown RBP13.01□□□□□ -0.33
DFFB-209ENST00000477548 HS3ST4Q9Y661 456 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 ZSWIM8A7E2V4 1837 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 A8MX80 341 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 ESR1P03372 595 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 FHP07954 510 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 PKMP14618 531 aaKnown RBP13.01□□□□□ -0.33
DFFB-209ENST00000477548 KCNE1P15382 129 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 HLA-DPA1P20036 260 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 CDKN1CP49918 316 aaPredicted RBP13.01□□□□□ -0.33
DFFB-209ENST00000477548 HOXC5Q00444 222 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 SLC14A1Q13336 389 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 PRAMEF19Q5SWL8 479 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 ZNF648Q5T619 568 aaPredicted RBP13.01□□□□□ -0.33
DFFB-209ENST00000477548 RGMBQ6NW40 437 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 MSANTD2Q6P1R3 559 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 CREB3L2Q70SY1 520 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 ZZZ3Q8IYH5 903 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 ZNF557Q8N988 423 aaPredicted RBP13.01□□□□□ -0.33
DFFB-209ENST00000477548 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 ZNF556Q9HAH1 456 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 MS4A12Q9NXJ0 267 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 COQ3Q9NZJ6 369 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 KLHL21Q9UJP4 597 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 GABRQQ9UN88 632 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 DUSP12Q9UNI6 340 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 DOCK3Q8IZD9 2030 aa13.01□□□□□ -0.33
DFFB-209ENST00000477548 TEX51A0A1B0GUA7 166 aa13□□□□□ -0.33
DFFB-209ENST00000477548 M0R129 80 aa13□□□□□ -0.33
DFFB-209ENST00000477548 HAS3O00219 553 aa13□□□□□ -0.33
DFFB-209ENST00000477548 SLC28A1O00337 649 aa13□□□□□ -0.33
DFFB-209ENST00000477548 CA12O43570 354 aa13□□□□□ -0.33
DFFB-209ENST00000477548 OR1I1O60431 355 aa13□□□□□ -0.33
DFFB-209ENST00000477548 GUCA1CO95843 209 aa13□□□□□ -0.33
DFFB-209ENST00000477548 SLC10A3P09131 477 aa13□□□□□ -0.33
DFFB-209ENST00000477548 KDELR2P33947 212 aa13□□□□□ -0.33
DFFB-209ENST00000477548 POU6F2P78424 691 aaPredicted RBP13□□□□□ -0.33
DFFB-209ENST00000477548 TAGLNQ01995 201 aaKnown RBP13□□□□□ -0.33
DFFB-209ENST00000477548 KHDRBS1Q07666 443 aaKnown RBP eCLIP13□□□□□ -0.33
DFFB-209ENST00000477548 TNK1Q13470 666 aa13□□□□□ -0.33
DFFB-209ENST00000477548 EIF4HQ15056 248 aaKnown RBP13□□□□□ -0.33
DFFB-209ENST00000477548 TOR1AIP1Q5JTV8 583 aa13□□□□□ -0.33
DFFB-209ENST00000477548 LRIF1Q5T3J3 769 aa13□□□□□ -0.33
DFFB-209ENST00000477548 PLET1Q6UQ28 207 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms