RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 CCDC189A1A4V9 331 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 HMX2A2RU54 273 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SLC35E2BP0CK96 405 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 CDH1P12830 882 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 GGT5P36269 586 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 FOLR3P41439 243 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 PMS2P54278 862 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 C19orf57Q0VDD7 668 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 KCNAB2Q13303 367 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SLC9A5Q14940 896 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 NDUFA9Q16795 377 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 HKDC1Q2TB90 917 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SULT1C3Q6IMI6 304 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 TRMT10CQ7L0Y3 403 aaKnown RBP12.8□□□□□ -0.36
ACTN4-205ENST00000477174 TBC1D1Q86TI0 1168 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-205ENST00000477174 ISCA2Q86U28 154 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 THOC6Q86W42 341 aaKnown RBP12.8□□□□□ -0.36
ACTN4-205ENST00000477174 RAB43Q86YS6 212 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 PLD3Q8IV08 490 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 KLHDC8AQ8IYD2 350 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 ARHGEF39Q8N4T4 335 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 TBC1D19Q8N5T2 526 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 EIF1ADQ8N9N8 165 aaKnown RBP12.8□□□□□ -0.36
ACTN4-205ENST00000477174 CAMKVQ8NCB2 501 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SLC44A1Q8WWI5 657 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SLC5A11Q8WWX8 675 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 COL26A1Q96A83 441 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 TM4SF19Q96DZ7 209 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 MRRFQ96E11 262 aaKnown RBP12.8□□□□□ -0.36
ACTN4-205ENST00000477174 CABS1Q96KC9 395 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 C10orf90Q96M02 699 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 CAPS2Q9BXY5 557 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SEMA4CQ9C0C4 833 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SLC25A18Q9H1K4 315 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SYNPO2LQ9H987 977 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 CNOT10Q9H9A5 744 aaKnown RBP12.8□□□□□ -0.36
ACTN4-205ENST00000477174 TLK1Q9UKI8 766 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SH2B3Q9UQQ2 575 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 RUVBL1Q9Y265 456 aaKnown RBP12.8□□□□□ -0.36
ACTN4-205ENST00000477174 SLC22A14Q9Y267 594 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 PTRH2Q9Y3E5 179 aaKnown RBP12.8□□□□□ -0.36
ACTN4-205ENST00000477174 DYRK1BQ9Y463 629 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 IKBKGQ9Y6K9 419 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 BOD1L1Q8NFC6 3051 aa12.8□□□□□ -0.36
ACTN4-205ENST00000477174 CFAP46Q8IYW2 2715 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 A0A087X1B8 175 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 VSTM2BA6NLU5 285 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 LCMT2O60294 686 aaKnown RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 CNOT3O75175 753 aaKnown RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 C2P06681 752 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 INHBAP08476 426 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 LTA4HP09960 611 aaKnown RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 RHOXF2BP0C7M4 288 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 GNAZP19086 355 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 OR1D4P47884 311 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 SLC6A12P48065 614 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 SERPINB9P50453 376 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 CSRP3P50461 194 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 UAP1Q16222 522 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 NKG7Q16617 165 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 FAM69BQ5VUD6 431 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 MED25Q71SY5 747 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 VN1R4Q7Z5H5 301 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 CMC1Q7Z7K0 106 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 ZNF843Q8N446 348 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 TMEM102Q8N9M5 508 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 MFSD9Q8NBP5 474 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 SLC13A3Q8WWT9 602 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 NEIL2Q969S2 332 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 RHOXF2Q9BQY4 288 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 UNKQ9C0B0 810 aaKnown RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 DRC3Q9H069 523 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 PELI2Q9HAT8 420 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 ZNF282Q9UDV7 671 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 MAU2Q9Y6X3 613 aa12.79□□□□□ -0.36
ACTN4-205ENST00000477174 TLN1Q9Y490 2541 aaKnown RBP12.79□□□□□ -0.36
ACTN4-205ENST00000477174 HEATR5BQ9P2D3 2071 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 TRBC2A0A5B9 178 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 FEZF1A0PJY2 475 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 MKRN2OSH3BPM6 223 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 RFPL1O75677 317 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 C1QL1O75973 258 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 KRT38O76015 456 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 IPO13O94829 963 aaKnown RBP12.78□□□□□ -0.36
ACTN4-205ENST00000477174 MED26O95402 600 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 IGHEP01854 428 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 PRB1P04280 392 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 CNTFP26441 200 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 TYK2P29597 1187 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 BCL6P41182 706 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 MSH2P43246 934 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 KCNC1P48547 511 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 RRADP55042 308 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 OCA2Q04671 838 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 PWP1Q13610 501 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 COL9A2Q14055 689 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms