RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 LRFN5Q96NI6 719 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 HIST1H2AJQ99878 128 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 EGFL8Q99944 293 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 H2AFJQ9BTM1 129 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 AICDAQ9GZX7 198 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 VPS11Q9H270 941 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 CUTCQ9NTM9 273 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 NDOR1Q9UHB4 597 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 MDC1Q14676 2089 aaKnown RBP11.87□□□□□ -0.51
APTX-220ENST00000476858 HYKKA2RU49 373 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CDC14CA4D256 554 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ZNF839A8K0R7 811 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 C4orf51C9J302 202 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 FOXS1O43638 330 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 RFPL1O75677 317 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 KLF7O75840 302 aaPredicted RBP11.86□□□□□ -0.51
APTX-220ENST00000476858 WDR47O94967 919 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 FKBP9O95302 570 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ABHD2P08910 425 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 LTA4HP09960 611 aaKnown RBP11.86□□□□□ -0.51
APTX-220ENST00000476858 SBK3P0C264 359 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CCNYL3P0C7X3 344 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ALAS2P22557 587 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 TNFRSF8P28908 595 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CRABP2P29373 138 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 DEKP35659 375 aaKnown RBP11.86□□□□□ -0.51
APTX-220ENST00000476858 ABATP80404 500 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CDKL1Q00532 357 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 SYT16Q17RD7 645 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 DEFB109BQ30KR1 87 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 NKAIN1Q4KMZ8 207 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ZC3H12BQ5HYM0 836 aaKnown RBP11.86□□□□□ -0.51
APTX-220ENST00000476858 MLIPQ5VWP3 458 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CAPN13Q6MZZ7 669 aaPredicted RBP11.86□□□□□ -0.51
APTX-220ENST00000476858 TLDC1Q6P9B6 456 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 FRA10AC1Q70Z53 315 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 TRMT10CQ7L0Y3 403 aaKnown RBP11.86□□□□□ -0.51
APTX-220ENST00000476858 ADAMTSL2Q86TH1 951 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 C17orf64Q86WR6 236 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CYP4X1Q8N118 509 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CSNK1A1LQ8N752 337 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ANKRD53Q8N9V6 530 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 KCT2Q8NC54 265 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 OR2W6PQ8NHA6 318 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 MZB1Q8WU39 189 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ANKRD7Q92527 254 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ISL2Q96A47 359 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ZBTB9Q96C00 473 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ACSS2Q9NR19 701 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 ENAMQ9NRM1 1142 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 TMEM184CQ9NVA4 438 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CTSFQ9UBX1 484 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 PTBP2Q9UKA9 531 aaKnown RBP11.86□□□□□ -0.51
APTX-220ENST00000476858 RNF112Q9ULX5 631 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 SNX7Q9UNH6 387 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 FARSAQ9Y285 508 aaKnown RBP11.86□□□□□ -0.51
APTX-220ENST00000476858 PCDHGA6Q9Y5G7 932 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 CCDC88CQ9P219 2028 aa11.86□□□□□ -0.51
APTX-220ENST00000476858 EXOC1LA0A1B0GW35 172 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 K7EM74 188 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 DSCR3O14972 297 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 MAP3K7O43318 606 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 CREG1O75629 220 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 CCNDBP1O95273 360 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 SLU7O95391 586 aaKnown RBP11.85□□□□□ -0.51
APTX-220ENST00000476858 MT-ND3P03897 115 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 UMODP07911 640 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 INHBAP08476 426 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 ANXA5P08758 320 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 FAM87AP0C7U9 286 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 EZRP15311 586 aaKnown RBP11.85□□□□□ -0.51
APTX-220ENST00000476858 CD22P20273 847 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 PTPN4P29074 926 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 TYK2P29597 1187 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 MSH2P43246 934 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 SERPINB8P50452 374 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 ATP6V0D1P61421 351 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 MAT1AQ00266 395 aaKnown RBP11.85□□□□□ -0.51
APTX-220ENST00000476858 CHAF1BQ13112 559 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 NCF4Q15080 339 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 ERCC6LQ2NKX8 1250 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 CPZQ66K79 652 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 CYB5D1Q6P9G0 228 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 TMPRSS11BQ86T26 416 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 PDSS2Q86YH6 399 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 KLHDC8AQ8IYD2 350 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 ABHD11Q8NFV4 315 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 OR4K1Q8NGD4 311 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 ADAMTS17Q8TE56 1095 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 SLC5A11Q8WWX8 675 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
APTX-220ENST00000476858 TM4SF19Q96DZ7 209 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 NDC1Q9BTX1 674 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 TRIM54Q9BYV2 358 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 SLC7A5P2Q9GIP4 190 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 CD274Q9NZQ7 290 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 ANKMY1Q9P2S6 941 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 ACOT9Q9Y305 439 aa11.85□□□□□ -0.51
APTX-220ENST00000476858 SMG1Q96Q15 3661 aaKnown RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 ATRXP46100 2492 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms