RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 RAB42Q8N4Z0 105 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 CHDHQ8NE62 594 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-213ENST00000476777 LILRB4Q8NHJ6 448 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 GBP4Q96PP9 640 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 OR2A5Q96R48 311 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 TTC1Q99614 292 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 ZNF559Q9BR84 538 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 ACAT2Q9BWD1 397 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 GSX1Q9H4S2 264 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-213ENST00000476777 KCNK13Q9HB14 408 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 IFNKQ9P0W0 207 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 SLC2A6Q9UGQ3 507 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 RUVBL2Q9Y230 463 aaKnown RBP10.73□□□□□ -0.69
BRCA1-213ENST00000476777 EFR3BQ9Y2G0 817 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 NKX2-6A6NCS4 301 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 GABRR3A8MPY1 467 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 P2RX6O15547 441 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 TOXO94900 526 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 SUN1O94901 812 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 CYC1P08574 325 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 DRD2P14416 443 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 ZNF24P17028 368 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 CTNNA2P26232 953 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 MSX1P28360 303 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 CMPK1P30085 196 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 PTGER1P34995 402 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 CCNFP41002 786 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 TPM4P67936 248 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 FAM53BQ14153 422 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 TMED2Q15363 201 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 SLC25A25Q6KCM7 469 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 FAM98AQ8NCA5 519 aaKnown RBP10.72□□□□□ -0.69
BRCA1-213ENST00000476777 OR4L1Q8NH43 312 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 M1APQ8TC57 530 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 OSBPL8Q9BZF1 889 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 UCK2Q9BZX2 261 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 MRPS30Q9NP92 439 aaKnown RBP10.72□□□□□ -0.69
BRCA1-213ENST00000476777 MMP25Q9NPA2 562 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 DLL4Q9NR61 685 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 ZNHIT6Q9NWK9 470 aaKnown RBP10.72□□□□□ -0.69
BRCA1-213ENST00000476777 SPATA7Q9P0W8 599 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 KCNN3Q9UGI6 736 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.72□□□□□ -0.69
BRCA1-213ENST00000476777 HRH3Q9Y5N1 445 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 MRFAP1Q9Y605 127 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 ZANQ9Y493 2812 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 PHF3Q92576 2039 aaKnown RBP10.72□□□□□ -0.69
BRCA1-213ENST00000476777 MPDZO75970 2070 aa10.72□□□□□ -0.69
BRCA1-213ENST00000476777 OR2W5A6NFC9 320 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 SOWAHDA6NJG2 315 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 PRMT5O14744 637 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 SLC25A12O75746 678 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 HOXD4P09016 255 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 CHRNB4P30926 498 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 PTPN7P35236 360 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 PPP2R2AP63151 447 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 OC90Q02509 493 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 ACVR1Q04771 509 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 EXT1Q16394 746 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 MAPKAPK3Q16644 382 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 MINDY4Q4G0A6 757 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 ZNF468Q5VIY5 522 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 CES4AQ5XG92 561 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 ZNF425Q6IV72 752 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 CEP128Q6ZU80 1094 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 ANKRD37Q7Z713 158 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 LDB1Q86U70 411 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 TAB3Q8N5C8 712 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 CPSF7Q8N684 471 aaKnown RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 HORMAD2Q8N7B1 307 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 FAM71DQ8N9W8 422 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 OR52K1Q8NGK4 314 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 GSDMBQ8TAX9 411 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 FAM57AQ8TBR7 257 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 SKA2Q8WVK7 121 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 ASB5Q8WWX0 329 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 NINJ1Q92982 152 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 RERGQ96A58 199 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 ZNF778Q96MU6 729 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 OLFM1Q99784 485 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 CCM2LQ9NUG4 571 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 ABHD10Q9NUJ1 306 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 LRFN1Q9P244 771 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 C19orf25Q9UFG5 118 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 GNPTGQ9UJJ9 305 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 RNF6Q9Y252 685 aa10.71□□□□□ -0.69
BRCA1-213ENST00000476777 RPH3AQ9Y2J0 694 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 R3HDM2Q9Y2K5 976 aaKnown RBP10.71□□□□□ -0.69
BRCA1-213ENST00000476777 NBEAL1Q6ZS30 2694 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 A0A1B0GTH9 108 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 TMEM200CA6NKL6 621 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 FAM90A27PA6NNH2 459 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 TXNDC9O14530 226 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 NME2P1O60361 137 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 ZNF189O75820 626 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-213ENST00000476777 ERGP11308 486 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 PKMP14618 531 aaKnown RBP10.7□□□□□ -0.7
BRCA1-213ENST00000476777 NME2P22392 152 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 PTGS2P35354 604 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms