RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TSNQ15631 228 aaKnown RBP22.89■■□□□ 1.25
CPNE1-223ENST00000475146 NKG7Q16617 165 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 ZXDCQ2QGD7 858 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-223ENST00000475146 GRTP1Q5TC63 336 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 ADAMTSL2Q86TH1 951 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 TMEM151BQ8IW70 566 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 TMEM102Q8N9M5 508 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-223ENST00000475146 SLC26A1Q9H2B4 701 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 SOX17Q9H6I2 414 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-223ENST00000475146 WDR54Q9H977 334 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 DMGDHQ9UI17 866 aaKnown RBP22.89■■□□□ 1.25
CPNE1-223ENST00000475146 CDC14AQ9UNH5 594 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 OARD1Q9Y530 152 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 MDC1Q14676 2089 aaKnown RBP22.89■■□□□ 1.25
CPNE1-223ENST00000475146 CCDC88CQ9P219 2028 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 FEZF1A0PJY2 475 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 FAM155BO75949 473 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 ANXA5P08758 320 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 NPPBP16860 134 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 GRK3P35626 688 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 NAB1Q13506 487 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 SLMAPQ14BN4 828 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 GARNL3Q5VVW2 1013 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 TCTN3Q6NUS6 607 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 SHISA6Q6ZSJ9 500 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 MED25Q71SY5 747 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 SPATA6LQ8N4H0 392 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 SPSB2Q99619 263 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 SLC25A23Q9BV35 468 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 DERL2Q9GZP9 239 aa22.88■■□□□ 1.25
CPNE1-223ENST00000475146 SPTA1P02549 2419 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 K7EM74 188 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 PRPF4O43172 522 aaKnown RBP eCLIP22.87■■□□□ 1.252e-8■□□□□ 10.5
CPNE1-223ENST00000475146 CCR8P51685 355 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 OCA2Q04671 838 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 NDUFA9Q16795 377 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 CEP128Q6ZU80 1094 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 PPP1R32Q7Z5V6 425 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 IFT81Q8WYA0 676 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 THAP11Q96EK4 314 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 MVB12AQ96EY5 273 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 FER1L6-AS2Q96M78 137 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 OR4K3Q96R72 315 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 YIPF2Q9BWQ6 316 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 FAM129AQ9BZQ8 928 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 DRC3Q9H069 523 aa22.87■■□□□ 1.25
CPNE1-223ENST00000475146 ZNF282Q9UDV7 671 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-223ENST00000475146 G3BP2Q9UN86 482 aaKnown RBP22.87■■□□□ 1.25
CPNE1-223ENST00000475146 KALRNO60229 2985 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 WISP3O95389 354 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-223ENST00000475146 CCDC166P0CW27 439 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 BCL6P41182 706 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 PGDP52209 483 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 RAB10P61026 200 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 CDKL1Q00532 357 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 ASB18Q6ZVZ8 466 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 VN1R4Q7Z5H5 301 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 PRSS58Q8IYP2 241 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 MRRFQ96E11 262 aaKnown RBP22.86■■□□□ 1.25
CPNE1-223ENST00000475146 MMABQ96EY8 250 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-223ENST00000475146 TSNARE1Q96NA8 513 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 P4HTMQ9NXG6 502 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 DYRK1BQ9Y463 629 aa22.86■■□□□ 1.25
CPNE1-223ENST00000475146 KCNE1BA0A087WTH5 132 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 A0A0A6YYC8 382 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-223ENST00000475146 A6NL46 340 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 I3L1I5 382 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-223ENST00000475146 FFAR3O14843 346 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 GPR42O15529 346 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 IGHEP01854 428 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 PHBP35232 272 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 MEF2AQ02078 507 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-223ENST00000475146 DSG2Q14126 1118 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 CSHL1Q14406 222 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 ZKSCAN8Q15776 578 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-223ENST00000475146 GLE1Q53GS7 698 aaKnown RBP22.85■■□□□ 1.25
CPNE1-223ENST00000475146 ATG14Q6ZNE5 492 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 RAPH1Q70E73 1250 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 ASPGQ86U10 573 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 THOC6Q86W42 341 aaKnown RBP22.85■■□□□ 1.25
CPNE1-223ENST00000475146 CAMKVQ8NCB2 501 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 ABHD11Q8NFV4 315 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 STT3BQ8TCJ2 826 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 SLC5A11Q8WWX8 675 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 MIEF2Q96C03 454 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 MACROD1Q9BQ69 325 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 CRB3Q9BUF7 120 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 NINJ2Q9NZG7 142 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 TRPC4Q9UBN4 977 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 PCDHGA9Q9Y5G4 932 aaKnown RBP22.85■■□□□ 1.25
CPNE1-223ENST00000475146 TLN1Q9Y490 2541 aaKnown RBP22.85■■□□□ 1.25
CPNE1-223ENST00000475146 PCSK5Q92824 1860 aa22.85■■□□□ 1.25
CPNE1-223ENST00000475146 FASNP49327 2511 aaKnown RBP22.84■■□□□ 1.25
CPNE1-223ENST00000475146 NCF1BA6NI72 391 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-223ENST00000475146 VSTM2BA6NLU5 285 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 NCF1CA8MVU1 366 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-223ENST00000475146 SUV39H1O43463 412 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 NCF1P14598 390 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-223ENST00000475146 MMP11P24347 488 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 HNMTP50135 292 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms