RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CBX4O00257 560 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 GRM6O15303 877 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 LRCH4O75427 683 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ERCC1P07992 297 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 SAGP10523 405 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 ITGAMP11215 1152 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 F3P13726 295 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PLS3P13797 630 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 DGKAP23743 735 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 DCKP27707 260 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SP3Q02447 781 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PPP3CAQ08209 521 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ITGADQ13349 1161 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SNTB1Q13884 538 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 EMC2Q15006 297 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 TAF1AQ15573 450 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 RAB30Q15771 203 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SLC18A3Q16572 532 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PRSS53Q2L4Q9 553 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 KLHL22Q53GT1 634 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 OR2B11Q5JQS5 317 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SPANXN2Q5MJ10 180 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 PLEKHS1Q5SXH7 462 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 APOBEC3HQ6NTF7 200 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 ACSM5Q6NUN0 579 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 VWA1Q6PCB0 445 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CYHR1Q6ZMK1 362 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SLC35D2Q76EJ3 337 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RTN4RL2Q86UN3 420 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RBM45Q8IUH3 476 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 ARRDC1Q8N5I2 433 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 OR4D6Q8NGJ1 314 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RNASE11Q8TAA1 199 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 ELMO1Q92556 727 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 NSL1Q96IY1 281 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 RAB3IPQ96QF0 476 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 TEAD3Q99594 435 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MGME1Q9BQP7 344 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 WDR83Q9BRX9 315 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 C1orf43Q9BWL3 253 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MAGT1Q9H0U3 335 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ACTL8Q9H568 366 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ARMT1Q9H993 441 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ANKRA2Q9H9E1 313 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 DDX19AQ9NUU7 478 aaKnown RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 PLEK2Q9NYT0 353 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ADAM30Q9UKF2 790 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 KCNJ14Q9UNX9 436 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MOKQ9UQ07 419 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 WDR81Q562E7 1941 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 ASXL2Q76L83 1435 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 A0A087WZY1 265 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PDHXO00330 501 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TFECO14948 347 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 OR10H3O60404 316 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 UGT1A9O60656 530 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TRMUO75648 421 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 IFNA2P01563 188 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 IFNGP01579 166 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PPBPP02775 128 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TK1P04183 234 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SERPINB2P05120 415 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MELTFP08582 738 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ITGA5P08648 1049 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ZDHHC11BP0C7U3 371 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ADRA2CP18825 462 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 UGT1A1P22309 533 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CCNOP22674 350 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ME2P23368 584 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PRKCHP24723 683 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ARNTP27540 789 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FRKP42685 505 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 PRKAG1P54619 331 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ADPRHP54922 357 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MLLT10P55197 1068 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MYL7Q01449 175 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FMO1Q01740 532 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SP2Q02086 613 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PTH1RQ03431 593 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SCN1BQ07699 218 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SLC39A6Q13433 755 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ASAH1Q13510 395 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 DNASE1L3Q13609 305 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CDK10Q15131 360 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GPR68Q15743 365 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ATP6AP1Q15904 470 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 BAK1Q16611 211 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KNOP1Q1ED39 458 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 RAB41Q5JT25 222 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PDZK1Q5T2W1 519 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GPR157Q5UAW9 335 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ABHD17BQ5VST6 288 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ELP2Q6IA86 826 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CFAP77Q6ZQR2 320 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ACAD11Q709F0 780 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KCNK18Q7Z418 384 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SATL1Q86VE3 508 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TMEM35BQ8NCS4 154 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 C18orf25Q96B23 403 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 R3HDM4Q96D70 268 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms