RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TMEM98Q9Y2Y6 226 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PCDHGC4Q9Y5F7 938 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 hCG_2039718K7EN88 272 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ARVCFO00192 962 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PSMD11O00231 422 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 WBP4O75554 376 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 KCNK5O95279 499 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PDYNP01213 254 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 YES1P07947 543 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 JUPP14923 745 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 AMD1P17707 334 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 SDC1P18827 310 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 FUT4P22083 530 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 IGFBP6P24592 240 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 RRM2P31350 389 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 OR1G1P47890 313 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 RGS6P49758 472 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ARPC4P59998 168 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 RHAGQ02094 409 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CREMQ03060 361 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 SCN1BQ07699 218 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 BCL2L1Q07817 233 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ACSM2AQ08AH3 577 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 GBX1Q14549 363 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 DMC1Q14565 340 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CPSF6Q16630 551 aaKnown RBP eCLIP5.93□□□□□ -1.46
HERC4-209ENST00000473533 RNF219Q5W0B1 726 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 SPRYD7Q5W111 196 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ACSM2BQ68CK6 577 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 LRRC66Q68CR7 880 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 DESI1Q6ICB0 168 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 NOXRED1Q6NXP6 359 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CEP68Q76N32 757 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 CAMKMTQ7Z624 323 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ZNF598Q86UK7 904 aaKnown RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 SYNPOQ8N3V7 929 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PNPLA1Q8N8W4 532 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 HJURPQ8NCD3 748 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 KIAA1143Q96AT1 154 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 TSSK3Q96PN8 268 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 HBEGFQ99075 208 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 YIPF2Q9BWQ6 316 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 BTBD2Q9BX70 525 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 SLC12A9Q9BXP2 914 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 BRF2Q9HAW0 419 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 BPIFA1Q9NP55 256 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ZDHHC3Q9NYG2 299 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 FLRT1Q9NZU1 646 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PNMA8BQ9ULN7 279 aaPredicted RBP5.93□□□□□ -1.46
HERC4-209ENST00000473533 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.93□□□□□ -1.462e-12■■■■□ 19.7
HERC4-209ENST00000473533 SATB2Q9UPW6 733 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 NOD1Q9Y239 953 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 ASB1Q9Y576 335 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 PCDHGA6Q9Y5G7 932 aa5.93□□□□□ -1.46
HERC4-209ENST00000473533 A0A0D9SEW6 157 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 ZNF197O14709 1029 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CAPN5O15484 640 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 FZD6O60353 706 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 F11P03951 625 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 OR4Q2P0C623 313 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 HOXA9P31269 272 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PGFP49763 221 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SEPHS1P49903 392 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CDKN1CP49918 316 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 RORCP51449 518 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 RAB25P57735 213 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 FCHO2Q0JRZ9 810 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SLC13A2Q13183 592 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 MBTPS1Q14703 1052 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SYT16Q17RD7 645 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 GTDC1Q4AE62 458 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SPIN4Q56A73 249 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PRAMEF19Q5SWL8 479 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 PLEKHS1Q5SXH7 462 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 ADGRF1Q5T601 910 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TRIM40Q6P9F5 258 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TMC5Q6UXY8 1006 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 ZNF517Q6ZMY9 492 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 ANKS3Q6ZW76 656 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 UBE2R2Q712K3 238 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 SLC24A5Q71RS6 500 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 CCDC190Q86UF4 302 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 NXPE1Q8N323 547 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 GEMIN6Q8WXD5 167 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 AP3S1Q92572 193 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TPD52L3Q96J77 140 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 WDFY2Q96P53 400 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SEPT5Q99719 369 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 DUSP26Q9BV47 211 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 C2orf49Q9BVC5 232 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 SLC22A4Q9H015 551 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 TNKS2Q9H2K2 1166 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 ZBTB20Q9HC78 741 aaPredicted RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 RAD18Q9NS91 495 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 ELOVL2Q9NXB9 296 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 FNDC3AQ9Y2H6 1198 aaKnown RBP5.92□□□□□ -1.46
HERC4-209ENST00000473533 LOC100506127A0A0U1RQW1 187 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 HMX3A6NHT5 357 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SNTNA6NMZ2 147 aa5.92□□□□□ -1.46
HERC4-209ENST00000473533 SLC38A8A6NNN8 435 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms