RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 NEK4P51957 841 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 ARFIP2P53365 341 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 LOXL3P58215 753 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 GGTLC2Q14390 218 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 MUM1Q2TAK8 710 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 C2CD6Q53TS8 623 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 BEX5Q5H9J7 111 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 NSUN5P2Q63ZY6 315 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 DET1Q7L5Y6 550 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 ANKRD37Q7Z713 158 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 TMEM156Q8N614 296 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 PSD4Q8NDX1 1056 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 SMAP2Q8WU79 429 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-206ENST00000471968 NAT14Q8WUY8 206 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 FAM168AQ92567 244 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 ANKRD9Q96BM1 317 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-206ENST00000471968 C3orf49Q96BT1 292 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 ZNF653Q96CK0 615 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 C10orf90Q96M02 699 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 SPATA13Q96N96 652 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 ZNF285Q96NJ3 590 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 FAM111AQ96PZ2 611 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 PRR14Q9BWN1 585 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 EXOC1Q9NV70 894 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 KCMF1Q9P0J7 381 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 CNTN6Q9UQ52 1028 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 DNMT3AQ9Y6K1 912 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-206ENST00000471968 SCINQ9Y6U3 715 aa6.06□□□□□ -1.44
HDAC3-206ENST00000471968 PABPN1LA6NDY0 278 aaKnown RBP6.05□□□□□ -1.44
HDAC3-206ENST00000471968 PPP1R12AO14974 1030 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-206ENST00000471968 KPNA5O15131 536 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 PRPF4O43172 522 aaKnown RBP eCLIP6.05□□□□□ -1.44
HDAC3-206ENST00000471968 ANXA5P08758 320 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 CCKARP32238 428 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 SHMT2P34897 504 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 RFC1P35251 1148 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-206ENST00000471968 DIO3P55073 304 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 TPI1P60174 286 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 MAT1AQ00266 395 aaKnown RBP6.05□□□□□ -1.44
HDAC3-206ENST00000471968 GCNT1Q02742 428 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 ACTN3Q08043 901 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-206ENST00000471968 FAM189A2Q15884 450 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 PPP2R5EQ16537 467 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 NRF1Q16656 503 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 ATP13A5Q4VNC0 1218 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 SFT2D3Q587I9 215 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 RALGPS1Q5JS13 557 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 GK5Q6ZS86 529 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 REC114Q7Z4M0 266 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 SLFN11Q7Z7L1 901 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 CFAP206Q8IYR0 622 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 BBS5Q8N3I7 341 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 C9orf106Q8NAJ2 232 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 OR2L2Q8NH16 312 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 BRSK1Q8TDC3 778 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 ELP5Q8TE02 316 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 HTRA1Q92743 480 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 PROX1Q92786 737 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 UBE2FQ969M7 185 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 FBXW5Q969U6 566 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 MMABQ96EY8 250 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-206ENST00000471968 CABS1Q96KC9 395 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 ZNF599Q96NL3 588 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 VPS35Q96QK1 796 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 JMJD8Q96S16 334 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 LPAR4Q99677 370 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 SYT3Q9BQG1 590 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 SFXN3Q9BWM7 321 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 IL1RL2Q9HB29 575 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 PDP1Q9P0J1 537 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-206ENST00000471968 TMEM59LQ9UK28 342 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 CDC14AQ9UNH5 594 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 ERVK-11Q9UQG0 969 aa6.05□□□□□ -1.44
HDAC3-206ENST00000471968 FRAS1Q86XX4 4008 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 A0A1W2PP18 115 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 SOWAHDA6NJG2 315 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 CCT8L1PA6NM43 557 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 EPHB6O15197 1021 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 KLF4O43474 513 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 ZNF354AO60765 605 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-206ENST00000471968 PEX11BO96011 259 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 PRLP01236 227 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 TPSB2P20231 275 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 PEBP1P30086 187 aaKnown RBP6.04□□□□□ -1.44
HDAC3-206ENST00000471968 SDC4P31431 198 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 UGT2B10P36537 528 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 USP8P40818 1118 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 SLC26A3P40879 764 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 AGTR2P50052 363 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 SLC26A5P58743 744 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 PCDH1Q08174 1060 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 ITKQ08881 620 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 MMRN1Q13201 1228 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 USP10Q14694 798 aaKnown RBP6.04□□□□□ -1.44
HDAC3-206ENST00000471968 TPSAB1Q15661 275 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 TYSND1Q2T9J0 566 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 P3H1Q32P28 736 aa6.04□□□□□ -1.44
HDAC3-206ENST00000471968 BEAN1Q3B7T3 259 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms