RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 C8orf76Q96K31 380 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 C12orf42Q96LP6 360 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 UBXN6Q9BZV1 441 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 TRIM15Q9C019 465 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 SH3GLB2Q9NR46 395 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 KRT84Q9NSB2 600 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 BLOC1S4Q9NUP1 217 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 SEC63Q9UGP8 760 aaKnown RBP4.88□□□□□ -1.63
CCDC39-202ENST00000471307 SPIN1Q9Y657 262 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-202ENST00000471307 DOCK1Q14185 1865 aa4.88□□□□□ -1.63
CCDC39-202ENST00000471307 IGHV4-4A0A075B6R2 117 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 A0A1W2PR77 199 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 ZBTB5O15062 677 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 CYTH3O43739 400 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 ZBED4O75132 1171 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 TOMM70O94826 608 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 CELF2O95319 508 aaKnown RBP4.87□□□□□ -1.63
CCDC39-202ENST00000471307 SCG2P13521 617 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 PRLRP16471 622 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 CALML3P27482 149 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 STAT2P52630 851 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 CDH11P55287 796 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 MRPS5P82675 430 aaKnown RBP4.87□□□□□ -1.63
CCDC39-202ENST00000471307 PPIL2Q13356 520 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 KCNC3Q14003 757 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 TAF13Q15543 124 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 CTU2Q2VPK5 515 aaKnown RBP4.87□□□□□ -1.63
CCDC39-202ENST00000471307 CST9Q5W186 159 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 GALNT17Q6IS24 598 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 TRIM65Q6PJ69 517 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 MOB2Q70IA6 237 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF440Q8IYI8 595 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 ADGRF2Q8IZF7 708 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 SCML4Q8N228 414 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 WDTC1Q8N5D0 677 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 CCDC12Q8WUD4 166 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-202ENST00000471307 HSD17B8Q92506 261 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 MOCOSQ96EN8 888 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 MYADMQ96S97 322 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 PITPNM3Q9BZ71 974 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 ZSCAN16Q9H4T2 348 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-202ENST00000471307 VAT1LQ9HCJ6 419 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 HOXC10Q9NYD6 342 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 NPAP1Q9NZP6 1156 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 EXOGQ9Y2C4 368 aaKnown RBP4.87□□□□□ -1.63
CCDC39-202ENST00000471307 ATP6V1DQ9Y5K8 247 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 TRPM7Q96QT4 1865 aa4.87□□□□□ -1.63
CCDC39-202ENST00000471307 PHIPQ8WWQ0 1821 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 A0A1W2PRB8 838 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 PGPEP1LA6NFU8 196 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 H7C423 109 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 DNM1LO00429 736 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ATP6V0E1O15342 81 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 TRMUO75648 421 aaKnown RBP4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ZFAND5O76080 213 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 PIGNO95427 931 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 NGFP01138 241 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 U2AF2P26368 475 aaKnown RBP eCLIP4.86□□□□□ -1.63
CCDC39-202ENST00000471307 GNA11P29992 359 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 HMGCS2P54868 508 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 SNRPD1P62314 119 aaKnown RBP4.86□□□□□ -1.63
CCDC39-202ENST00000471307 PPP2R2BQ00005 443 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 PLA2G7Q13093 441 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 GPR17Q13304 367 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 COG2Q14746 738 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ATL3Q6DD88 541 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 CLEC17AQ6ZS10 378 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 KRT77Q7Z794 578 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 TBC1D1Q86TI0 1168 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-202ENST00000471307 LSMEM2Q8N112 164 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 OR8H2Q8N162 312 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF614Q8N883 585 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ZNF383Q8NA42 475 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 CCDC148Q8NFR7 591 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 OPTNQ96CV9 577 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 NSL1Q96IY1 281 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ATOH8Q96SQ7 321 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 RBM4BQ9BQ04 359 aaKnown RBP4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ABHD6Q9BV23 337 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 GLT8D2Q9H1C3 349 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ACKR4Q9NPB9 350 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 KLHL8Q9P2G9 620 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-202ENST00000471307 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ISY1Q9ULR0 285 aaKnown RBP4.86□□□□□ -1.63
CCDC39-202ENST00000471307 PCDHGA5Q9Y5G8 931 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 SMAD5-AS1Q9Y6J3 95 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 PASKQ96RG2 1323 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 PAPPA2Q9BXP8 1791 aa4.86□□□□□ -1.63
CCDC39-202ENST00000471307 ESYT2A0FGR8 921 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 VPS37CA5D8V6 355 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 TO15178 435 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 USO1O60763 962 aaKnown RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 FLOT1O75955 427 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 RSL1D1O76021 490 aaKnown RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 MMP1P03956 469 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 RAF1P04049 648 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 CLTBP09497 229 aa4.85□□□□□ -1.63
CCDC39-202ENST00000471307 EFNA1P20827 205 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-202ENST00000471307 MRPL12P52815 198 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms