RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	ANKRD33	Q7Z3H0	272 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	LRRTM1	Q86UE6	522 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	APCDD1	Q8J025	514 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	METTL21A	Q8WXB1	218 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	NSMAF	Q92636	917 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	OMA1	Q96E52	524 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	WWTR1	Q9GZV5	400 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	ACTL8	Q9H568	366 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	EGLN3	Q9H6Z9	239 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	RAVER2	Q9HCJ3	691 aa	Known RBP	4.58	□□□□□ -1.68
SSB-209	ENST00000470621	THEG	Q9P2T0	379 aa		4.58	□□□□□ -1.68
SSB-209	ENST00000470621	IGSF1	Q8N6C5	1336 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621		E9PQ18	207 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	SOCS3	O14543	225 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	PI15	O43692	258 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	DKC1	O60832	514 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
SSB-209	ENST00000470621	KRT33A	O76009	404 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	STAG3L1	P0CL83	205 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	KRT5	P13647	590 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	PTAFR	P25105	342 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	CDC25C	P30307	473 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	DUT	P33316	252 aa	Known RBP	4.57	□□□□□ -1.68
SSB-209	ENST00000470621	HSD17B3	P37058	310 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	OR3A2	P47893	321 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	NPY4R	P50391	375 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	ZNF41	P51814	821 aa	Predicted RBP	4.57	□□□□□ -1.68
SSB-209	ENST00000470621	KIF6	Q6ZMV9	814 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	PRSS33	Q8NF86	280 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	CNRIP1	Q96F85	164 aa	Predicted RBP	4.57	□□□□□ -1.68
SSB-209	ENST00000470621	EGFL8	Q99944	293 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	TRIM51	Q9BSJ1	452 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	NUDT4	Q9NZJ9	180 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	GIMAP2	Q9UG22	337 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	PRDM4	Q9UKN5	801 aa		4.57	□□□□□ -1.68
SSB-209	ENST00000470621	IGKV3D-20	A0A0C4DH25	116 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	GLTPD2	A6NH11	291 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	MPTX1	A8MV57	137 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	CCDC188	H7C350	402 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	TIMM44	O43615	452 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	PRAF2	O60831	178 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	HLA-F	P30511	346 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	CRKL	P46109	303 aa	Known RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	HUNK	P57058	714 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	OR1D5	P58170	312 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	CYCS	P99999	105 aa	Known RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	NFATC2	Q13469	925 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	TAB1	Q15750	504 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	TAZ	Q16635	292 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	CYB5D1	Q6P9G0	228 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	ERN2	Q76MJ5	926 aa	Known RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	FCRLA	Q7L513	359 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	CCDC186	Q7Z3E2	898 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	PIGW	Q7Z7B1	504 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	RCOR2	Q8IZ40	523 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	IQUB	Q8NA54	791 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621		Q8NBF4	154 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	SEPT1	Q8WYJ6	367 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	CDCA3	Q99618	268 aa	Predicted RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	BAG1	Q99933	345 aa	Predicted RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	TDRD1	Q9BXT4	1180 aa	Known RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	SDCBP2	Q9H190	292 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	RIMS4	Q9H426	269 aa	Predicted RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	RAB9B	Q9NP90	201 aa		4.56	□□□□□ -1.68
SSB-209	ENST00000470621	TEX10	Q9NXF1	929 aa	Predicted RBP	4.56	□□□□□ -1.68
SSB-209	ENST00000470621	ERI2	A8K979	691 aa	Known RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621	KRTAP9-6	A8MVA2	160 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	KPNA7	A9QM74	516 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	EPM2A	B3EWF7	344 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	FAM86B1	E9PN63	330 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	IDH3B	O43837	385 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	FAM86B2	P0C5J1	330 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	TRIM49	P0CI25	452 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	TRIM49C	P0CI26	452 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	PRKAR1A	P10644	381 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	CD59	P13987	128 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	FDPS	P14324	419 aa	Known RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621	SP100	P23497	879 aa	Predicted RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621	ELAVL4	P26378	380 aa	Known RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621	RGS7	P49802	495 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	GMPS	P49915	693 aa	Predicted RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621	DCDC1	P59894	354 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	IRX4	P78413	519 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	MOGAT2	Q3SYC2	334 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	TAF1B	Q53T94	588 aa	Predicted RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621	C6orf136	Q5SQH8	315 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	TRIM65	Q6PJ69	517 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621	NRARP	Q7Z6K4	114 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	ABI3BP	Q7Z7G0	1075 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	GPC2	Q8N158	579 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	FAM89B	Q8N5H3	189 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621	NEDD4L	Q96PU5	975 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	BTBD9	Q96Q07	612 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	SNX25	Q9H3E2	840 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	MED20	Q9H944	212 aa		4.55	□□□□□ -1.68
SSB-209	ENST00000470621	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.55	□□□□□ -1.68
SSB-209	ENST00000470621		A0A1W2PPW3	197 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621		F8VVB4	439 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms