RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 NOTCH3Q9UM47 2321 aa3.37□□□□□ -1.87
BRCA2-202ENST00000470094 MYH14Q7Z406 1995 aaKnown RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 ARHGEF37A1IGU5 675 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 E9PQ18 207 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 FPGTO14772 594 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 CELF2O95319 508 aaKnown RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 PENKP01210 267 aaPredicted RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 CSN3P07498 182 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 GP1BBP13224 206 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 EPCAMP16422 314 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 CYP11B2P19099 503 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 SP100P23497 879 aaPredicted RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 POLR2LP62875 67 aaKnown RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 CYCSP99999 105 aaKnown RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 MYL7Q01449 175 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 RBPJQ06330 500 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 NECTIN1Q15223 517 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 NPTX1Q15818 432 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 DOK6Q6PKX4 331 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 Q6ZRP5 223 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 CCAR2Q8N163 923 aaKnown RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 NUP93Q8N1F7 819 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 MR1Q95460 341 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 ANKRD9Q96BM1 317 aaPredicted RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 OTUB1Q96FW1 271 aaPredicted RBP3.36□□□□□ -1.87
BRCA2-202ENST00000470094 MGME1Q9BQP7 344 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 TXNDC16Q9P2K2 825 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 RPGRIP1LQ68CZ1 1315 aa3.36□□□□□ -1.87
BRCA2-202ENST00000470094 A0A0U1RQK1 487 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 A0A1W2PR80 420 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF320A2RRD8 509 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 SNURFLB1AK76 121 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 H0YAE9 185 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 TEX28O15482 410 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 AP5Z1O43299 807 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 RPS6KA5O75582 802 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 SIX3O95343 332 aaPredicted RBP3.35□□□□□ -1.87
BRCA2-202ENST00000470094 BAG2O95816 211 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 SUPT20HL2P0C7V6 817 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 ZSCAN5DPP0CG00 497 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 ATP6V1B1P15313 513 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 ACHEP22303 614 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 UGT1A4P22310 534 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 PRKACGP22612 351 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 AZGP1P25311 298 aaKnown RBP3.35□□□□□ -1.87
BRCA2-202ENST00000470094 HLA-FP30511 346 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 HSPA4P34932 840 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 HNF4AP41235 474 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 TSFMP43897 325 aaKnown RBP3.35□□□□□ -1.87
BRCA2-202ENST00000470094 DNA2P51530 1060 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 LIMK1P53667 647 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 GSCP56915 257 aaPredicted RBP3.35□□□□□ -1.87
BRCA2-202ENST00000470094 ACSM1Q08AH1 577 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 TRAP1Q12931 704 aaKnown RBP3.35□□□□□ -1.87
BRCA2-202ENST00000470094 PTK6Q13882 451 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 SLMAPQ14BN4 828 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 EFTUD2Q15029 972 aaKnown RBP eCLIP3.35□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF674Q2M3X9 581 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 C2CD6Q53TS8 623 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 ZRANB3Q5FWF4 1079 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 PIWIL3Q7Z3Z3 882 aaKnown RBP3.35□□□□□ -1.87
BRCA2-202ENST00000470094 ADCK2Q7Z695 626 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 TLK2Q86UE8 772 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 MFN1Q8IWA4 741 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 CCDC170Q8IYT3 715 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 KLHDC1Q8N7A1 406 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 RASGEF1AQ8N9B8 481 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 OR7A2PQ8NGA2 310 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 KCNE4Q8WWG9 221 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 PROX1Q92786 737 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 RMDN2Q96LZ7 410 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 PKP2Q99959 881 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 SLC2A11Q9BYW1 496 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 DNAI2Q9GZS0 605 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 NYXQ9GZU5 481 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 GSN-AS1Q9NRJ2 163 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 PANK4Q9NVE7 773 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.35□□□□□ -1.87
BRCA2-202ENST00000470094 MTRRQ9UBK8 725 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 SNX5Q9Y5X3 404 aa3.35□□□□□ -1.87
BRCA2-202ENST00000470094 A0A087WV48 116 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 A0A1W2PPK0 400 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 CASTOR2A6NHX0 329 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 ANXA2P2A6NMY6 339 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 STX6O43752 255 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 SNX3O60493 162 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 KRT33AO76009 404 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 IGHEP01854 428 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 OR52Z1P0C646 297 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 RPL35AP18077 110 aaKnown RBP3.34□□□□□ -1.87
BRCA2-202ENST00000470094 CD27P26842 260 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 HOXC13P31276 330 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 PRKCIP41743 596 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 CAPZA1P52907 286 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 FASTKD3Q14CZ7 662 aaKnown RBP3.34□□□□□ -1.87
BRCA2-202ENST00000470094 EXT1Q16394 746 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 TYSND1Q2T9J0 566 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 PLBD1Q6P4A8 553 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms