RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 CUTCQ9NTM9 273 aa8.19□□□□□ -1.1
SSBP1-208ENST00000469123 DNAJC11Q9NVH1 559 aa8.19□□□□□ -1.1
SSBP1-208ENST00000469123 DCDC2Q9UHG0 476 aa8.19□□□□□ -1.1
SSBP1-208ENST00000469123 NXT1Q9UKK6 140 aaKnown RBP8.19□□□□□ -1.1
SSBP1-208ENST00000469123 IKZF3Q9UKT9 509 aa8.19□□□□□ -1.1
SSBP1-208ENST00000469123 CDC14AQ9UNH5 594 aa8.19□□□□□ -1.1
SSBP1-208ENST00000469123 FAM208BQ5VWN6 2430 aa8.19□□□□□ -1.1
SSBP1-208ENST00000469123 CACNA1GO43497 2377 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 FRYQ5TBA9 3013 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 A0A0J9YVX5 310 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CCDC151A5D8V7 595 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 KRT87PA6NCN2 255 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 NCF1BA6NI72 391 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 NCF1CA8MVU1 366 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 H0YGG7 62 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 STX16-NPEPL1H3BU86 382 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 K7ENP7 123 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 K7EPI3 171 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 STX16O14662 325 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 HAT1O14929 419 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 DSCR3O14972 297 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 KLK8O60259 260 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 TIAF1O95411 115 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ALBP02768 609 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 SLC35G6P0C7Q6 338 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CDH1P12830 882 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 GFAPP14136 432 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 NCF1P14598 390 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 KRT15P19012 456 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 TAC1P20366 129 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ITGAXP20702 1163 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 GCAP28676 217 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CASP2P42575 452 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 GCGRP47871 477 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CCT5P48643 541 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 PGGT1BP53609 377 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 VSX2P58304 361 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ARF3P61204 181 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CSNK1G2P78368 415 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 REEP5Q00765 189 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 DLG1Q12959 904 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 DNASE1L3Q13609 305 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 PWP1Q13610 501 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 SETDB1Q15047 1291 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 PCBP2Q15366 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 TBCCQ15814 346 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 HIST2H2ACQ16777 129 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 PRTGQ2VWP7 1150 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 DEFB110Q30KQ9 67 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 TECRLQ5HYJ1 363 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 WASHC2DQ5SRD0 308 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 C10orf62Q5T681 223 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 UBAP2Q5T6F2 1119 aaKnown RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ATG9BQ674R7 924 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 HIST2H2AA3Q6FI13 130 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 FBXO42Q6P3S6 717 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 INO80CQ6PI98 192 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 NXPE4Q6UWF7 544 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 TIPARPQ7Z3E1 657 aaKnown RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 FAM20CQ8IXL6 584 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 SPATA6LQ8N4H0 392 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CSNK1A1LQ8N752 337 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 MFSD9Q8NBP5 474 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 TRPV3Q8NET8 790 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 NEIL2Q969S2 332 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 NACC2Q96BF6 587 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ALKBH8Q96BT7 664 aaKnown RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 PYCR2Q96C36 320 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 WDR34Q96EX3 536 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 PTCD3Q96EY7 689 aaKnown RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 NAF1Q96HR8 494 aaKnown RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 VPS50Q96JG6 964 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 SCYL1Q96KG9 808 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 GPR78Q96P69 363 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 IP6K3Q96PC2 410 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 GBP5Q96PP8 586 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 OR4K3Q96R72 315 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 TMEM109Q9BVC6 243 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CD244Q9BZW8 370 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 NT5DC2Q9H857 520 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CLK4Q9HAZ1 481 aaKnown RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ABCF3Q9NUQ8 709 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 PCMTD2Q9NV79 361 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 CUEDC1Q9NWM3 386 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 SENP1Q9P0U3 644 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 COPG2Q9UBF2 871 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 OPTCQ9UBM4 332 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 GPN3Q9UHW5 284 aaPredicted RBP8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ADGRE2Q9UHX3 823 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ZFP69BQ9UJL9 534 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 MID2Q9UJV3 735 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 SLC22A14Q9Y267 594 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 DMXL2Q8TDJ6 3036 aa8.18□□□□□ -1.1
SSBP1-208ENST00000469123 ASPMQ8IZT6 3477 aa8.17□□□□□ -1.1
SSBP1-208ENST00000469123 TEX51A0A1B0GUA7 166 aa8.17□□□□□ -1.1
SSBP1-208ENST00000469123 HYKKA2RU49 373 aa8.17□□□□□ -1.1
SSBP1-208ENST00000469123 UBXN8O00124 270 aa8.17□□□□□ -1.1
SSBP1-208ENST00000469123 MAP2K7O14733 419 aa8.17□□□□□ -1.1
SSBP1-208ENST00000469123 PCDH17O14917 1159 aa8.17□□□□□ -1.1
SSBP1-208ENST00000469123 EFSO43281 561 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms