RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	F5	P12259	2224 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278		A0A087WUV0	522 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278		A0A0U1RQJ8	604 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	BCLAF3	A2AJT9	711 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CCDC162P	A2VCL2	907 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CPED1	A4D0V7	1026 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HNRNPCL2	B2RXH8	293 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ANHX	E9PGG2	379 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SH2B2	O14492	632 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CASQ2	O14958	399 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ATP2A1	O14983	1001 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	INSIG1	O15503	277 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HCRTR2	O43614	444 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CTDNEP1	O95476	244 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	YEATS4	O95619	227 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TMEM11	P17152	192 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GABRB1	P18505	474 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RRM1	P23921	792 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	U2AF2	P26368	475 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GCH1	P30793	250 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CCT6A	P40227	531 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PRCP	P42785	496 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FOXG1	P55316	489 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NLRP5	P59047	1200 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NANOS2	P60321	138 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DYNLL1	P63167	89 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GSTO1	P78417	241 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PHEX	P78562	749 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GABPA	Q06546	454 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PPID	Q08752	370 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TRAF2	Q12933	501 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MRPL28	Q13084	256 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HTR4	Q13639	388 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CTF1	Q16619	201 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DUSP28	Q4G0W2	176 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CFAP58	Q5T655	872 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C12orf60	Q5U649	245 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TMEM110	Q86TL2	294 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ADGRF2	Q8IZF7	708 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	LSMEM2	Q8N112	164 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	BEST3	Q8N1M1	668 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SRBD1	Q8N5C6	995 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MAB21L3	Q8N8X9	362 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF397	Q8NF99	534 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GSDMB	Q8TAX9	411 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ELP5	Q8TE02	316 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FAM216A	Q8WUB2	273 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SEPT8	Q92599	483 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CDKL2	Q92772	493 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RHBDF1	Q96CC6	855 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FAM120B	Q96EK7	910 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZMAT2	Q96NC0	199 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	OR2A14	Q96R47	310 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SERINC2	Q96SA4	455 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PCYT2	Q99447	389 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SH3GL2	Q99962	352 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TMEM204	Q9BSN7	226 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	OSBPL10	Q9BXB5	764 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NACAP1	Q9BZK3	213 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NAPB	Q9H115	298 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TNMD	Q9H2S6	317 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HIPK2	Q9H2X6	1198 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PIGM	Q9H3S5	423 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PLK3	Q9H4B4	646 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RNF41	Q9H4P4	317 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	OR14J1	Q9UGF5	321 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	KCNS2	Q9ULS6	477 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PCDHGB4	Q9UN71	923 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CLIC4	Q9Y696	253 aa		4.84	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.84	□□□□□ -1.64
CACNA1C-223	ENST00000465278	TG	P01266	2768 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	PLIN4	Q96Q06	1357 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	NEDD4	P46934	1319 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278		A0A1W2PQ09	198 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	AGAP14	A8MT82	685 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278		M0QZ24	198 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	LSM1	O15116	133 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	SCAMP1	O15126	338 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	SMAD6	O43541	496 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	HS6ST1	O60243	411 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	ATP9A	O75110	1047 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	AKAP3	O75969	853 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	BAG3	O95817	575 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	VIM	P08670	466 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	RPSA	P08865	295 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	TROVE2	P10155	538 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	FDPS	P14324	419 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	ANXA7	P20073	488 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	SYT1	P21579	422 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	HOXA6	P31267	233 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	CAMP	P49913	170 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	DSCR9	P59020	149 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	CSNK2A1	P68400	391 aa	Predicted RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	BASP1	P80723	227 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	PRKG2	Q13237	762 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	PDE1C	Q14123	709 aa	Predicted RBP	4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	NFATC4	Q14934	902 aa		4.83	□□□□□ -1.64
CACNA1C-223	ENST00000465278	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms