RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 AP1M1Q9BXS5 423 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 HOXD1Q9GZZ0 328 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 DUS4LO95620 317 aaKnown RBP5.03□□□□□ -1.6
PTCD3-205ENST00000464541 BAG3O95817 575 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 IGHEP01854 428 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 APOA4P06727 396 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 PRKACGP22612 351 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 HNF4AP41235 474 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 OR3A2P47893 321 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 NAGLUP54802 743 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 MFAP3P55082 362 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 FASTKD3Q14CZ7 662 aaKnown RBP5.03□□□□□ -1.6
PTCD3-205ENST00000464541 SPOUT1Q5T280 376 aaKnown RBP5.03□□□□□ -1.6
PTCD3-205ENST00000464541 ANKRD13CQ8N6S4 541 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 NUP37Q8NFH4 326 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 SLC26A7Q8TE54 656 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 GTF3AQ92664 365 aaKnown RBP5.03□□□□□ -1.6
PTCD3-205ENST00000464541 P2RX5Q93086 422 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 RADILQ96JH8 1075 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 PIGQQ9BRB3 760 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 UPF3AQ9H1J1 476 aaKnown RBP5.03□□□□□ -1.6
PTCD3-205ENST00000464541 MTHFD2LQ9H903 347 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-205ENST00000464541 PKD2L2Q9NZM6 624 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 IL36AQ9UHA7 158 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 CSNK1G3Q9Y6M4 447 aa5.03□□□□□ -1.6
PTCD3-205ENST00000464541 TBX6O95947 436 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-205ENST00000464541 PENKP01210 267 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-205ENST00000464541 ZSCAN5DPP0CG00 497 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 SFTPDP35247 375 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 RGS7P49802 495 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 XGP55808 180 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 TMEM50BP56557 158 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 CDH18Q13634 790 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 C2CD6Q53TS8 623 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 SUSD4Q5VX71 490 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 PRSS55Q6UWB4 352 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-205ENST00000464541 KIF6Q6ZMV9 814 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 FRRS1Q6ZNA5 592 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 SLC24A5Q71RS6 500 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 GTSCR1Q86UQ5 136 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 CCAR2Q8N163 923 aaKnown RBP5.02□□□□□ -1.61
PTCD3-205ENST00000464541 PRSS33Q8NF86 280 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 KLHL5Q96PQ7 755 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 IWS1Q96ST2 819 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 CABLES2Q9BTV7 478 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 SPHK2Q9NRA0 654 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 PANK4Q9NVE7 773 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 TEX10Q9NXF1 929 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-205ENST00000464541 ANAPC5Q9UJX4 755 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 PA2G4Q9UQ80 394 aaKnown RBP5.02□□□□□ -1.61
PTCD3-205ENST00000464541 CACNA1FO60840 1977 aa5.02□□□□□ -1.61
PTCD3-205ENST00000464541 A0A1W2PPW3 197 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 MEX3AA1L020 520 aaKnown RBP5.01□□□□□ -1.61
PTCD3-205ENST00000464541 C17orf105B2RV13 164 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 SORBS2O94875 1100 aaKnown RBP5.01□□□□□ -1.61
PTCD3-205ENST00000464541 SERPING1P05155 500 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 AADACP22760 399 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 SP100P23497 879 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-205ENST00000464541 DCDC1P59894 354 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 IRX4P78413 519 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 SULT2A1Q06520 285 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 NECTIN1Q15223 517 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 FGD3Q5JSP0 725 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 MOXD1Q6UVY6 613 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 ANKRD33Q7Z3H0 272 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 NRARPQ7Z6K4 114 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 CATSPERDQ86XM0 798 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 TIGD4Q8IY51 512 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 OR4D10Q8NGI6 311 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 CHURC1Q8WUH1 139 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 PYCR2Q96C36 320 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 C18orf12Q96KH6 178 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 VGLL1Q99990 258 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 KATNB1Q9BVA0 655 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 CDK19Q9BWU1 502 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 UBXN6Q9BZV1 441 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 SNX25Q9H3E2 840 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 RAVER2Q9HCJ3 691 aaKnown RBP5.01□□□□□ -1.61
PTCD3-205ENST00000464541 NDE1Q9NXR1 346 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 WIPI2Q9Y4P8 454 aa5.01□□□□□ -1.61
PTCD3-205ENST00000464541 LOC105371242A0A075B767 164 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 E9PQ18 207 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 C9P02748 559 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 YES1P07947 543 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 CD59P13987 128 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 SOX3P41225 446 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 NFATC2Q13469 925 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 LPAL2Q16609 132 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 MOGAT2Q3SYC2 334 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 LRRC73Q5JTD7 316 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 DOK6Q6PKX4 331 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 DNAJB7Q7Z6W7 309 aaPredicted RBP5□□□□□ -1.61
PTCD3-205ENST00000464541 RAD54LQ92698 747 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 GDAP1L1Q96MZ0 367 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 ATOH8Q96SQ7 321 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 PKP2Q99959 881 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 MGME1Q9BQP7 344 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 OVOL2Q9BRP0 275 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 EDEM3Q9BZQ6 932 aa5□□□□□ -1.61
PTCD3-205ENST00000464541 RNF121Q9H920 327 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms