RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 OR4K3Q96R72 315 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 VPS11Q9H270 941 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 ALG9Q9H6U8 611 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 CNOT10Q9H9A5 744 aaKnown RBP10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 ENAMQ9NRM1 1142 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 POLHQ9Y253 713 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 SLC22A14Q9Y267 594 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 KCNE2Q9Y6J6 123 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 FER1L5A0AVI2 2057 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 SEC16AO15027 2179 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 FEZF1A0PJY2 475 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 HMX2A2RU54 273 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 PRPF4O43172 522 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 RIPK2O43353 540 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 H2AFYO75367 372 aaKnown RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 IPO13O94829 963 aaKnown RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 SLU7O95391 586 aaKnown RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 RECKO95980 971 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 CAPN1P07384 714 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 CCR10P46092 362 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 GCGRP47871 477 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 EMP3P54852 163 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 IRF9Q00978 393 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 MEF2AQ02078 507 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 DLG1Q12959 904 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 UGT8Q16880 541 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 ZXDCQ2QGD7 858 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 HKDC1Q2TB90 917 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 C18orf21Q32NC0 220 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 CDKL4Q5MAI5 379 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 CATSPEREQ5SY80 951 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 GARNL3Q5VVW2 1013 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 PRMT9Q6P2P2 845 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 TMPRSS11BQ86T26 416 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 ISCA2Q86U28 154 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 CAMKVQ8NCB2 501 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 LSM14AQ8ND56 463 aaKnown RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 ABHD11Q8NFV4 315 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 KCTD4Q8WVF5 259 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 NEIL2Q969S2 332 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 COL26A1Q96A83 441 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 WBP1Q96G27 269 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 CCDC77Q9BR77 488 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 PELI2Q9HAT8 420 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 ZNF304Q9HCX3 659 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 IGSF5Q9NSI5 407 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 NUDT4Q9NZJ9 180 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 ZNF180Q9UJW8 692 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 TCFL5Q9UL49 500 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 CDC14AQ9UNH5 594 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 RUVBL1Q9Y265 456 aaKnown RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 PTRH2Q9Y3E5 179 aaKnown RBP10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 MAU2Q9Y6X3 613 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 CCDC88CQ9P219 2028 aa10.1□□□□□ -0.79
TRAPPC12-213ENST00000461577 KCNE1BA0A087WTH5 132 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 TRBC2A0A5B9 178 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 SYCE1LA8MT33 242 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 TRIM49D1C9J1S8 452 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 UBXN8O00124 270 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 CLGNO14967 610 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 OR1F1O43749 312 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 KERAO60938 352 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 KLHL2O95198 593 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 STATHP02808 62 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 ALDOAP04075 364 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 SNRPAP09012 282 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 FURINP09958 794 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 GNAZP19086 355 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 FBLP22087 321 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 TNFRSF8P28908 595 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 OTX2P32243 289 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 BCL6P41182 706 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 FOLR3P41439 243 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 GDF5P43026 501 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 OR1D4P47884 311 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 SLC6A12P48065 614 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 GLRBP48167 497 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 HSPA7P48741 367 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 NFKB2Q00653 900 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 CDC16Q13042 620 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 IL10RAQ13651 578 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 ACAP2Q15057 778 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 LINC00303Q3SY05 128 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 NXPE4Q6UWF7 544 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 OVCH1Q7RTY7 1134 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 ASPGQ86U10 573 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 RAB43Q86YS6 212 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 KLHDC8AQ8IYD2 350 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 SNX31Q8N9S9 440 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 MFSD9Q8NBP5 474 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 PDPRQ8NCN5 879 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 OR4K1Q8NGD4 311 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 DCAKDQ8WVC6 231 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 UBLCP1Q8WVY7 318 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 THAP4Q8WY91 577 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.09□□□□□ -0.794e-6■■■■□ 24.2
TRAPPC12-213ENST00000461577 SLC39A7Q92504 469 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 FKBP10Q96AY3 582 aa10.09□□□□□ -0.79
TRAPPC12-213ENST00000461577 MVB12AQ96EY5 273 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms