RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SLAMF8Q9P0V8 285 aa15.28■□□□□ 0.04
CMTM3-203ENST00000460097 POU2F3Q9UKI9 436 aa15.28■□□□□ 0.04
CMTM3-203ENST00000460097 NEUROG3Q9Y4Z2 214 aa15.28■□□□□ 0.04
CMTM3-203ENST00000460097 CCDC163A0A0D9SF12 145 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 LOC285095A0A1B0GVY8 99 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 BCKDKO14874 412 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 SMAD6O43541 496 aaKnown RBP15.27■□□□□ 0.04
CMTM3-203ENST00000460097 TRIM16O95361 564 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 ANGPTL1O95841 491 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 CD160O95971 181 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 AGXTP21549 392 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 PXNP49023 591 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-203ENST00000460097 IFITM2Q01629 132 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 ZNF45Q02386 682 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 CLCA4Q14CN2 919 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 C9orf64Q5T6V5 341 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 DSG4Q86SJ6 1040 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 PIM3Q86V86 326 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 SLC7A5P1Q8MH63 180 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 TEX26Q8N6G2 289 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 ARL10Q8N8L6 244 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 PRSS33Q8NF86 280 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 OR2T12Q8NG77 320 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 HMGB4Q8WW32 186 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 OR2B2Q9GZK3 357 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 TMEFF2Q9UIK5 374 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-203ENST00000460097 ZNF229Q9UJW7 825 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 PCTPQ9UKL6 214 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 HCN4Q9Y3Q4 1203 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 ACTL7AQ9Y615 435 aa15.27■□□□□ 0.04
CMTM3-203ENST00000460097 PABPN1LA6NDY0 278 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 J3KR12 359 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 SNPHO15079 494 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 ANKRD28O15084 1053 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 LDB2O43679 373 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 PRAMEF11O60813 436 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 GABRG2P18507 467 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 PRKCDQ05655 676 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 DMWDQ09019 674 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 TCF15Q12870 199 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 SF3B4Q15427 424 aaKnown RBP eCLIP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 NPTX1Q15818 432 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 ATP6AP1LQ52LC2 224 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 INO80DQ53TQ3 878 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 UBE2UQ5VVX9 321 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 PNCKQ6P2M8 343 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 SHQ1Q6PI26 577 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 SYVN1Q86TM6 617 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 METTL3Q86U44 580 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 MDGA1Q8NFP4 955 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 OR6P1Q8NGX9 317 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 LILRB4Q8NHJ6 448 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 RHBDF1Q96CC6 855 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 LGALS12Q96DT0 336 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 SNX18Q96RF0 628 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 SIGLEC11Q96RL6 698 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 TRIM8Q9BZR9 551 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 CEP44Q9C0F1 390 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 IRF2BPLQ9H1B7 796 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 FBRSQ9HAH7 460 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 MARCH4Q9P2E8 410 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 KLQ9UEF7 1012 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 EIF3LQ9Y262 564 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 NOX1Q9Y5S8 564 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 AGAP5A6NIR3 686 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 AXIN1O15169 862 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 CD3EAPO15446 510 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 RECQL5O94762 991 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 EPOP01588 193 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 PCSK2P16519 638 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 EFNA1P20827 205 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 PSMA3P25788 255 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 MAGEA2P43356 314 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 FNTBP49356 437 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 ARSDP51689 593 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 IL10RBQ08334 325 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 KIAA0040Q15053 153 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 NKAPQ8N5F7 415 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 GLB1L3Q8NCI6 653 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 NELL1Q92832 810 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 MRGPRX1Q96LB2 322 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 MKRN2Q9H000 416 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 SP110Q9HB58 689 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 DCAF13Q9NV06 445 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 ZSCAN32Q9NX65 697 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 UBA2Q9UBT2 640 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 RNF112Q9ULX5 631 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 USP22Q9UPT9 525 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 FCF1Q9Y324 198 aaKnown RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 MAGED1Q9Y5V3 778 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-203ENST00000460097 SHROOM3Q8TF72 1996 aa15.26■□□□□ 0.03
CMTM3-203ENST00000460097 MUC22E2RYF6 1773 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-203ENST00000460097 METTL15A6NJ78 407 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 SUPT3HB4E1H0 165 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 TOR1BO14657 336 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-203ENST00000460097 LSM1O15116 133 aaKnown RBP15.25■□□□□ 0.03
CMTM3-203ENST00000460097 BNIP3LO60238 219 aa15.25■□□□□ 0.03
CMTM3-203ENST00000460097 RPP40O75818 363 aaKnown RBP15.25■□□□□ 0.03
CMTM3-203ENST00000460097 NDUFV2P19404 249 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms