RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ROGDIQ9GZN7 287 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 DRC3Q9H069 523 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 APMAPQ9HDC9 416 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 CUTCQ9NTM9 273 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 EPB42P16452 691 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 NPPBP16860 134 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 PSMB5P28074 263 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 CASP2P42575 452 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 CSNK1G2P78368 415 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 SYVN1Q86TM6 617 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 GALNT6Q8NCL4 622 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 SRFBP1Q8NEF9 429 aaKnown RBP10.24□□□□□ -0.77
UBR4-208ENST00000459947 ADAMTS18Q8TE60 1221 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 C14orf105Q9NVL8 296 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 GRID1Q9ULK0 1009 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 TSC22D4Q9Y3Q8 395 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 A0A0J9YVX5 310 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 TEX51A0A1B0GUA7 166 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 ZNF749O43361 778 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 MYBL2P10244 700 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 CDH1P12830 882 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 OR4D1Q15615 310 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 GSPT2Q8IYD1 628 aaKnown RBP10.24□□□□□ -0.77
UBR4-208ENST00000459947 MYRIPQ8NFW9 859 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 NT5CQ8TCD5 201 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 PTERQ96BW5 349 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 IQCGQ9H095 443 aaKnown RBP10.24□□□□□ -0.77
UBR4-208ENST00000459947 EPB41L4BQ9H329 900 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 WDR54Q9H977 334 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 COPG2Q9UBF2 871 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 CIDEBQ9UHD4 219 aa10.24□□□□□ -0.77
UBR4-208ENST00000459947 HYKKA2RU49 373 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 HMX2A2RU54 273 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 MEN1O00255 615 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 CASC3O15234 703 aaKnown RBP10.23□□□□□ -0.77
UBR4-208ENST00000459947 RORAP35398 523 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 ARFIP1P53367 373 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 STXBP1P61764 594 aaKnown RBP10.23□□□□□ -0.77
UBR4-208ENST00000459947 NFKB2Q00653 900 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 TLE3Q04726 772 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 RCN2Q14257 317 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 WASHC2DQ5SRD0 308 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 LSM14AQ8ND56 463 aaKnown RBP10.23□□□□□ -0.77
UBR4-208ENST00000459947 WBP1Q96G27 269 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 CENPKQ9BS16 269 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 FAM60AQ9NP50 221 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 PCDHGA4Q9Y5G9 962 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 H0YGG7 62 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 SCTRP47872 440 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 PRKAA2P54646 552 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 VSX2P58304 361 aaPredicted RBP10.23□□□□□ -0.77
UBR4-208ENST00000459947 ARF3P61204 181 aaPredicted RBP10.23□□□□□ -0.77
UBR4-208ENST00000459947 PPM1MQ96MI6 270 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 PCMTD2Q9NV79 361 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 CPSF2Q9P2I0 782 aaKnown RBP10.23□□□□□ -0.77
UBR4-208ENST00000459947 ZFP69BQ9UJL9 534 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 SLC22A7Q9Y694 548 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 PCM1Q15154 2024 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 H0YIG0 161 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 SFTPCP11686 197 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 GCGRP47871 477 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 HERC3Q15034 1050 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 LIPJQ5W064 366 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 OR2A5Q96R48 311 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 KLHL25Q9H0H3 589 aa10.23□□□□□ -0.77
UBR4-208ENST00000459947 H7BY64 318 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 MAP2K7O14733 419 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 RFPL1O75677 317 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 ATP5F1P24539 256 aaPredicted RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 DLSTP36957 453 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 AP2B1P63010 937 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 IRF8Q02556 426 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 ZNF33BQ06732 778 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 FBXO42Q6P3S6 717 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 ZNF517Q6ZMY9 492 aaPredicted RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 MBOAT1Q6ZNC8 495 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 ABHD13Q7L211 337 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 GPR155Q7Z3F1 870 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 TMPRSS11BQ86T26 416 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 EXT2Q93063 718 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 PRAP1Q96NZ9 151 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 SLC26A1Q9H2B4 701 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 PSD3Q9NYI0 1048 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 SLC22A14Q9Y267 594 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 FARSAQ9Y285 508 aaKnown RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 KIF26BQ2KJY2 2108 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 PMS2P1A4D2B8 440 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 K7ENP7 123 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 COPEO14579 308 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 CCNT2O60583 730 aaKnown RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 CLEC3AO75596 197 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 PIAS1O75925 651 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 ITGB2P05107 769 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 E2F2Q14209 437 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 INO80CQ6PI98 192 aaPredicted RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 CT55Q8WUE5 264 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 HNRNPLLQ8WVV9 542 aaKnown RBP10.22□□□□□ -0.77
UBR4-208ENST00000459947 GPR78Q96P69 363 aa10.22□□□□□ -0.77
UBR4-208ENST00000459947 RUFY1Q96T51 708 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms